Skip to content

Commit

Permalink
Added some docker documentation
Browse files Browse the repository at this point in the history
  • Loading branch information
ChristianMarzahl committed Nov 16, 2021
1 parent 142a1b4 commit 15f7b0d
Show file tree
Hide file tree
Showing 2 changed files with 13 additions and 3 deletions.
6 changes: 3 additions & 3 deletions .dockerignore
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
*.svs
*.p
*.tiff
.git
.vscode
.ipynb_checkpoints
**/.git
**/.vscode
**/.ipynb_checkpoints
10 changes: 10 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -13,6 +13,16 @@ docker run -p 8888:8888 bronzidocker/eiphwsi

Afterwards, please download the whole slide images with the following notebook. [Download.ipynb](SDATA/Download.ipynb)


### Build the docker container

```docker
docker build -t eiphwsi:latest .
docker tag eiphwsi:latest bronzidocker/eiphwsi
docker push bronzidocker/eiphwsi
```


### Slides

After downloading, the slides can be examined with [SlideRunner](https://github.com/DeepPathology/SlideRunner) or [EXACT](https://github.com/ChristianMarzahl/Exact). Annotations for [SlideRunner](Slides/SDATA_Final_Annotations.sqlite).
Expand Down

0 comments on commit 15f7b0d

Please sign in to comment.