Update mimic_ingest.py #4
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Removed references to external server to pick up person_source_value (this isn't anywhere in the person table in latest (mimic-iii v1.4)) Changed csv file open to start with .gz file (what is provided from physionet.org site for mimic-iii) Changed solr_url to match localhost install Small updates to progress print() statements to clarify progress (out of total rows) and HTTP response (200)
add'l tweaks after realizing some elements were hard to understand/hard-coded
code wasn't handling remaining rows/posting to server; this was fixed also made user parameter for document source more obvious and next to other user parameters
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Removed references to external server to pick up person_source_value (this isn't anywhere in the person table in latest (mimic-iii v1.4))
Changed csv file open to start with .gz file (what is provided from physionet.org site for mimic-iii)
Changed solr_url to match localhost install
Fixed issues where remaining rows beyond last full chunk weren't getting posted to solr
Small updates to progress print() statements to clarify progress (out of total rows) and HTTP response (200)