Package for automatically installing and updating R data sets from the GlycoDomainViewer data repository
Installation
devtools::install_github('hirenj/glycodomainR')
Obtain a CLIENT_ID and CLIENT_SECRET for access to datasets from the GlycoDomainViewer
Setup
R -e 'glycodomainR::initialize()'
R -e 'glycodomainR::install_packages()'
Paste in CLIENT_ID and CLIENT_SECRET when prompted
You can periodically update data using the following command
Updating data
R -e 'glycodomainR::update_packages()'
To set an alternative data repository, set the gatordata.server option
options(gatordata.server='https://alternative.server')