These are simple Image J macros written to get count or size/ area estimates for
- whole fly bodies
- immuno-staining images
- fly wings
either as the only ROI (for instance a single fly wing) or isolated from multiple ROIs (for instance from a 96-well plate; adapted from https://imagej.nih.gov/ij/plugins/readplate/index.html)
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These were written in ImageJ version 1.48 and have not been tested in the current version of ImageJ (v1.52). As with any bit of code, there is a good chance that these scripts may require tweaking to work with the most recent version.
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The most current version of ImageJ can be obtained at https://imagej.nih.gov/ij/download.html
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Older versions of ImageJ can be obtained at https://imagej.nih.gov/ij/download/jars/