Merge pull request #28 from EBIvariation/release/2.0-beta1

Release 2.0-beta1

README.md

@@ -72,7 +72,7 @@ If using a persistent (not in-memory database), the following information needs
 Other parameters are:
 
 * `config.db.read-preference`: In a distributed Mongo environment, replica to connect to (primary or secondary, default primary).
-* `--logging.level.embl.ebi.variation.eva`: DEBUG, INFO, WARN, ERROR supported among others. Recommended DEBUG.
+* `--logging.level.uk.ac.ebi.eva`: DEBUG, INFO, WARN, ERROR supported among others. Recommended DEBUG.
 * `--logging.level.org.opencb.opencga`: Recommended DEBUG.
 * `--logging.level.org.springframework`: Recommended INFO or WARN.
 

examples/application.properties

@@ -30,6 +30,6 @@ db.collections.features.name=features
 
 # LOGGING
 # https://docs.spring.io/spring-boot/docs/current/reference/html/boot-features-logging.html
-logging.level.embl.ebi.variation.eva=DEBUG
+logging.level.uk.ac.ebi.eva=DEBUG
 logging.level.org.opencb.opencga=DEBUG
 logging.level.org.springframework=INFO

pom.xml

@@ -4,9 +4,9 @@
          xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
     <modelVersion>4.0.0</modelVersion>
 
-    <groupId>embl.ebi.variation.eva</groupId>
+    <groupId>uk.ac.ebi.eva</groupId>
     <artifactId>eva-pipeline</artifactId>
-    <version>0.1</version>
+    <version>2.0-beta1</version>
 
 
     <parent>

src/main/resources/application.properties

@@ -50,6 +50,6 @@ db.collections.features.name=features
 
 # LOGGING
 # https://docs.spring.io/spring-boot/docs/current/reference/html/boot-features-logging.html
-logging.level.embl.ebi.variation.eva=DEBUG
+logging.level.uk.ac.ebi.eva=DEBUG
 logging.level.org.opencb.opencga=DEBUG
 logging.level.org.springframework=INFO

src/test/resources/logback-test.xml

@@ -16,7 +16,7 @@
 
 	<logger name="org.springframework" level="info" />
 	<logger name="org.opencb.opencga" level="info" />
-	<logger name="embl.ebi.variation.eva" level="debug" />
+	<logger name="uk.ac.ebi.eva" level="debug" />
 
 
 	<logger name="SkipLogging" level="INFO" additivity="false">
@@ -27,4 +27,4 @@
 		<appender-ref ref="console" />
 	</root>
 
-</configuration>
+</configuration>