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data, time, time_unit in MeasurementData not mandatory anymore
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haeussma committed Aug 20, 2024
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18 changes: 9 additions & 9 deletions docs/model.md
Original file line number Diff line number Diff line change
Expand Up @@ -46,8 +46,8 @@ This page provides comprehensive information about the structure and components
measurement(Measurement) --> measurementdata(MeasurementData)
measurement(Measurement) --> unitdefinition(UnitDefinition)
measurementdata(MeasurementData) --> unitdefinition(UnitDefinition)
measurementdata(MeasurementData) --> unitdefinition(UnitDefinition)
measurementdata(MeasurementData) --> datatypes(DataTypes)
measurementdata(MeasurementData) --> unitdefinition(UnitDefinition)
unitdefinition(UnitDefinition) --> baseunit(BaseUnit)
baseunit(BaseUnit) --> unittype(UnitType)

Expand All @@ -73,8 +73,8 @@ This page provides comprehensive information about the structure and components


## Ontologies
- [schema](https://schema.org/)
- [OBO](http://purl.obolibrary.org/obo/)
- [schema](https://schema.org/)


## Types
Expand Down Expand Up @@ -525,11 +525,6 @@ __data_unit__* [`UnitDefinition`](#unitdefinition)
- SI unit of the data that was measured.


__time_unit__* [`UnitDefinition`](#unitdefinition)

- Time unit of the replicate.


__data_type__* [`DataTypes`](#datatypes)

- Type of data that was measured (e.g. concentration)
Expand All @@ -540,16 +535,21 @@ __prepared__ `float`
- Amount of the reactant before the measurement. This field should be used for specifying the prepared amount of a species in the reaction mix. Not to be confused with


__data__* `list[float]`
__data__ `list[float]`

- Data that was measured.


__time__* `list[float]`
__time__ `list[float]`

- Time steps of the replicate.


__time_unit__ [`UnitDefinition`](#unitdefinition)

- Time unit of the replicate.


__is_simulated__* `boolean`

- Whether or not the data has been generated by simulation.
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