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perib merged 97 commits intodevEpistasisLab/tpot2:devfrom mainEpistasisLab/tpot2:mainCopy head branch name to clipboardJul 17, 2024

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Commits on Mar 19, 2024

• new search space working with est

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Commits on Mar 20, 2024

• edits

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Commits on Mar 22, 2024

• edits

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Commits on Mar 27, 2024

• tutorials fixes

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• edits to tutorials

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• Merge branch 'EpistasisLab:main' into new_search_space_def

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• Merge remote-tracking branch 'origin/dev' into new_search_space_def

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• edit

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• rng_ to rng

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• Merge pull request #122 from perib/new_search_space_def

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• graph and tree random length initial pipeline

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Commits on Mar 29, 2024

• flatten pipelines to graph, graphpipe params

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Commits on Apr 10, 2024

• flatten to graphpipeline, steadystate

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Commits on Apr 18, 2024

• lots of edits to configuration spaces

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• edits

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• edits

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• Merge pull request #123 from perib/new_search_space_def

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• fixes, passing tests

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• Merge pull request #124 from perib/new_search_space_def

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• more fixes with search spaces - wrapper, make sure all supported modules are included

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• Merge pull request #126 from perib/new_search_space_def

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Commits on Apr 19, 2024

• added unique_id, fixed issue where graphpipeline not correctly identifying classifiers/regressors

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• Merge pull request #127 from perib/new_search_space_def

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• Merge pull request #125 from EpistasisLab/dev

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• number of nodes on pipelines,gp, recursive + merge graphpipeline nodes, edit tests to remove some fits

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• added GaussianProcessClassifier, test for merge duplicate nodes,

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• Merge pull request #128 from perib/new_search_space_def

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Commits on Apr 23, 2024

• cleanup

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• updated dask version dependency

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Commits on Apr 24, 2024

• complexity objective for more classifiers, added regressors

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• bug fixes with configs and wrapper params

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• tpotclassifier and tpotregressor now use data size for search spaces

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• typo

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• typo

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• bump version

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• update version

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• Merge pull request #129 from perib/new_search_space_def

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• fix num_nodes test, add update checker, setup.py change

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• update setup.py

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• param_edits

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• edit space

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• optional inner classifiers/regressors

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• edit

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• edit version

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• Merge pull request #130 from perib/new_search_space_def

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Commits on Apr 25, 2024

• edit default space

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Commits on May 3, 2024

• bug fixes, fixed unique_id type (non-iterable tuples), fixed graphpipeline mutation function

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Commits on May 4, 2024

• make more mutation/cx functions available for gp

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• fixed crossover between different node types causing a crash. now different node types return false

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Commits on May 11, 2024

• unions, wrapping classifiers/regressors as transformers, multiple options in get_search_space now get flattened to have equal probability.

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Commits on May 15, 2024

• functions to convert tpot1 config dicts to tpot2

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• small note

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• Merge pull request #131 from perib/new_search_space_def

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• bug fix

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Commits on May 16, 2024

• search_space fixes

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• some bug fixes with configurations

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• Merge pull request #132 from perib/new_search_space_def

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• remove hardcoded wrappers that are no longer needed

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• Merge pull request #133 from perib/new_search_space_def

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• passed rng to the sp generative functions, updated dynamic union to not include duplicates

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• map elites section functions

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• import map elites selectors

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• config updates

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Commits on May 17, 2024

• Merge pull request #134 from perib/new_search_space_def

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• Update _version.py

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• Merge pull request #135 from EpistasisLab/jay-m-dev-patch-1

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• gradientboosting invalid crossover parser fix

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• one hot encoder no longer throws error by default on unknown categories

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Commits on May 18, 2024

• addded kbins dsitrcretizer with passthrough

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• make sure genetic feature selection always selects at least one column

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• dyanmic_linear_fix

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Commits on May 20, 2024

• fix bugs

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Commits on May 23, 2024

• catch dask error when closing, validation strategy now puts errors in the correct column and prevents a crash, base evolver can now terminate mid generation when max_time_seconds is reached,

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Commits on May 24, 2024

• Merge pull request #136 from perib/new_search_space_def

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Commits on Jun 7, 2024

• removed a cx function in union pipeline so that we don't unintentionally duplicate search spaces

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• added skip

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Commits on Jun 14, 2024

• imputer

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• added memory to sequential

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Commits on Jun 19, 2024

• Merge pull request #137 from perib/new_search_space_def

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Commits on Jun 29, 2024

• estimator with default search spaces. linear new default

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• tutorials fixes

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• Merge pull request #138 from perib/new_search_space_def

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Commits on Jul 9, 2024

• removed unused files, passed rng into default_rng

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• wrapper now crossover over hyperparametesr

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• made naming clearer

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• wrapper for crossover functions so that subclasses can use crossover instead of _crossover

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• tpot estimator documentation edit

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• update documentation

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• fixed imputation tutorial

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• fix

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• wrap fix

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Commits on Jul 10, 2024

• added check for infinite max_eval_time_seconds

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• Print out package versions and make tests verbose

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• Pin numpy version

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Commits on Jul 11, 2024

• Merge pull request #139 from perib/new_search_space_def

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• Resolve version conflicts and test conflicts

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• Merge pull request #140 from EpistasisLab/search_space_api

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