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Feature/SOF-7525 Add O-interstitial in SnO Tutorial #313

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Jan 3, 2025

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@@ -0,0 +1,138 @@
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Changes to mkdocs??

render_macros: true
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# O-interstitial Defect in SnO
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Oxygen interstitial Defect(s) in SnO.


```python
# Supercell parameters
SUPERCELL_MATRIX = [[1, 0, 0], [0, 1, 0], [0, 0, 1]]
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@timurbazhirov timurbazhirov Jan 1, 2025

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We should have a supercell, otherwise, the defect density turns out to be unreasonably high. Even the original figure has at least 2 cells, one without the defect. We could get the interstitial coordinate (in angstroms) from the unit cell, then create a larger supercell (to account for a specific defect density) and then place the interstitial to the coordinate obtained in the first step

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Yes, they have what must be 2x2x2 to remove the Sn, although it looks more like 1.5x1.5x2 on the picture...


## Introduction

This tutorial demonstrates how to create an oxygen interstitial defect in tin monoxide (SnO), following the methodology described in the literature.
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We should mention that voronoi site is used as a placement method and maybe add a link to the implementation and/or more information

@VsevolodX VsevolodX merged commit 9e647e2 into master Jan 3, 2025
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@VsevolodX VsevolodX deleted the feature/SOF-7525 branch January 3, 2025 02:33
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2 participants