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Change maf to af_allele2 in .snp files #29

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juhis opened this issue Oct 15, 2020 · 1 comment
Open

Change maf to af_allele2 in .snp files #29

juhis opened this issue Oct 15, 2020 · 1 comment

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@juhis
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juhis commented Oct 15, 2020

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@mkanai
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mkanai commented Oct 15, 2020

Good point! -- though, FINEMAP requires MAF to be MAF, not AF... I think we can add an extra column for .z file and merge it back after FINEMAP as we did for p column.

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@mkanai @juhis