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@FINNGEN

FINNGEN

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  1. finemapping-pipeline finemapping-pipeline Public

    Statistical fine-mapping pipeline in FinnGen

    WDL 28 9

  2. saige-pipelines saige-pipelines Public

    WDL 16 6

  3. CS-PRS-pipeline CS-PRS-pipeline Public

    PRS pipeline using PRS_CS

    Python 12

  4. META_ANALYSIS META_ANALYSIS Public

    Tools for doing x way meta-analysis

    Python 9 14

  5. regenie-pipelines regenie-pipelines Public

    WDL pipelines for running regenie

    WDL 8 4

  6. pheweb pheweb Public

    Forked from statgen/pheweb

    A tool to build multi-phenotype GWAS browsers

    Python 7 2

Repositories

Showing 10 of 73 repositories
  • coloc.susie.direct Public

    Colocalization on Susie results from FinnGen fine-mapping pipeline

    FINNGEN/coloc.susie.direct’s past year of commit activity
    R 1 0 0 0 Updated Jan 28, 2025
  • CO2AnalysisModules Public
    FINNGEN/CO2AnalysisModules’s past year of commit activity
    R 0 0 10 0 Updated Jan 28, 2025
  • pheweb Public Forked from statgen/pheweb

    A tool to build multi-phenotype GWAS browsers

    FINNGEN/pheweb’s past year of commit activity
    Python 7 MIT 68 46 3 Updated Jan 24, 2025
  • kanta_lab_harmonisation_public Public
    FINNGEN/kanta_lab_harmonisation_public’s past year of commit activity
    R 0 MIT 0 2 0 Updated Jan 24, 2025
  • pan-ukbb-mapping Public

    Mapping between FinnGen phenotypes and Pan-UKBB phenotypes

    FINNGEN/pan-ukbb-mapping’s past year of commit activity
    0 MIT 0 1 0 Updated Jan 17, 2025
  • risteys Public
    FINNGEN/risteys’s past year of commit activity
    Elixir 5 MIT 0 94 1 Updated Jan 16, 2025
  • ld_server Public

    Serve linkage disequilibrium

    FINNGEN/ld_server’s past year of commit activity
    Python 3 MIT 0 2 0 Updated Jan 16, 2025
  • META_ANALYSIS Public

    Tools for doing x way meta-analysis

    FINNGEN/META_ANALYSIS’s past year of commit activity
    Python 9 MIT 14 4 3 Updated Dec 30, 2024
  • autoreporting Public
    FINNGEN/autoreporting’s past year of commit activity
    Python 3 MIT 2 21 0 Updated Dec 23, 2024
  • CohortOperations2 Public
    FINNGEN/CohortOperations2’s past year of commit activity
    R 1 0 16 0 Updated Dec 23, 2024
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