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26 changes: 26 additions & 0 deletions docs/sphinx/README.md
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The following are needed for the documentation set-up:

- conda install sphinx
- conda install sphinxcontrib-bibtex
- conda install sphinx-book-theme

(See e.g. https://sphinx-themes.org/ for other choices of themes)


From within the sphinx directory:

- sphinx-build -b html source build
- or 'make html'


Then 'open build/html/index.html' will open the webpage.


Important files:

- sphinx/source/conf.py configures the set-up. The project name, authors, version as well as extensions and project theme can all be changed here.
- sphinx/source/index.rst is the 'front page', and table of contents etc are specified here
- sphinx/source/simunet_analysis.rst contains some first basic examples of how we can generate documentation directly from the code docstrings.


See also https://www.sphinx-doc.org/en/master/index.html for much more info on Sphinx
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4 changes: 4 additions & 0 deletions docs/sphinx/build/html/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: fcf1f77f5b6424e731a8bde7904ff971
tags: 645f666f9bcd5a90fca523b33c5a78b7
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4 changes: 4 additions & 0 deletions docs/sphinx/build/html/_sources/bibliography.rst
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**Bibliography**
================

.. bibliography:: simunet.bib
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