Log in to github container registry

HelikarLab · Aug 31, 2022 · 8c35235 · 8c35235
1 parent 846a9fe
commit 8c35235
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Showing 2 changed files with 11 additions and 4 deletions.
diff --git a/.github/workflows/dockerhub.yml b/.github/workflows/dockerhub.yml
@@ -32,6 +32,13 @@ jobs:
       - name: Checkout Repository
         uses: actions/checkout@v3
 
+      - name: Log in to Container Registry
+        uses: docker/login-action@v2
+        with:
+          registry: ${{ env.REGISTRY }}
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+
       # Get tag/release information for docker tags
       - name: Docker Metadata
         id: metadata
@@ -59,12 +66,12 @@ jobs:
 #          username: ${{ secrets.DOCKERHUB_USERNAME }}
 #          password: ${{ secrets.DOCKERHUB_TOKEN }}
 
+
+
       - name: Build and push
         uses: docker/build-push-action@v3
         with:
           context: .
           push: true
           tags: ${{ steps.metadata.outputs.tags }}
           labels: ${{ steps.metadata.outputs.labels }}
-          secrets: |
-            GIT_AUTH_TOKEN=${{ secrets.GITHUB_TOKEN }}
diff --git a/Dockerfile b/Dockerfile
@@ -30,8 +30,8 @@ RUN conda config --quiet --add channels conda-forge \
     && mamba clean --quiet --all --force-pkgs-dirs --yes \
     && R -e 'devtools::install_github("babessell1/zFPKM", quiet=TRUE)' \
     # Install jupyter extensions
-    && jupyter labextension install @jupyter-widgets/jupyterlab-manager \
-    && jupyter labextension install escher \
+    && jupyter labextension -y install @jupyter-widgets/jupyterlab-manager \
+    && jupyter labextension -y install escher \
     && jupyter trust "${JUPYTER_NOTEBOOK}" \
     && rm -f "${ENVIRONMENT_FILE}" "${HOME}/pip_install.txt" "${HOME}/mamba_install.txt"