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Fix conflicts
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CBroz1 committed Jan 19, 2024
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Expand Up @@ -4,8 +4,6 @@ There are several paths one can take to these notebooks. The notebooks have
two-digits in their names, the first of which indicates it's 'batch', as
described in the categories below.

<!-- TODO: Add links when names are finalized. -->

## 0. Intro

Everyone should complete the [Setup](./00_Setup.ipynb) and
Expand All @@ -27,13 +25,13 @@ sorting.

## 2. Position Pipeline

This series of notebooks covers tracking the position(s) of the animal. The user
can employ two different methods:
This series of notebooks covers tracking the position(s) of the animal. The
user can employ two different methods:

1. the simple [Trodes](20_Position_Trodes.ipynb) methods of tracking LEDs on the
animal's headstage
2. [DLC (DeepLabCut)](./21_Position_DLC_1.ipynb) which uses a neural network to
track the animal's body parts
1. the simple [Trodes](20_Position_Trodes.ipynb) methods of tracking LEDs on
the animal's headstage
2. [DLC (DeepLabCut)](./21_DLC.ipynb) which uses a neural network to
track the animal's body parts.

Either case can be followed by the
[Linearization notebook](./24_Linearization.ipynb) if the user wants to
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