Update rocker-seurat_4.4.0-5.0.3.strudel.yaml

New submitcmd
MonashBioinformaticsPlatform · Aug 23, 2024 · 845bb84 · 845bb84
1 parent 2ed99a6
commit 845bb84
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/m3/rocker-seurat_4.4.0-5.0.3.strudel.yaml b/m3/rocker-seurat_4.4.0-5.0.3.strudel.yaml
@@ -10,6 +10,7 @@ startscript: |
   chmod +x ~/.strudel2/rstudio.sh
 
   IMAGE=https://bioinformatics.erc.monash.edu/references/singularity/rocker-seurat_4.4.0-5.0.3.sif ~/.strudel2/rstudio.sh
+submitcmd: PYTHONPATH={{ s2path }}/forms /usr/bin/python3 {{ s2path }}/strudel2_cluster/submitform/submit_class.py desktop
 instactions:
   - name: Connect
     paramscmd: cat ~/.rstudio-rocker/rserver-{jobid}.json