minor modif dge slides

NBISweden · Mar 13, 2024 · a2159d5 · a2159d5
1 parent cc1349a
commit a2159d5
Show file tree

Hide file tree

Showing 2 changed files with 16 additions and 0 deletions.
diff --git a/data/boxplot.png b/data/boxplot.png
diff --git a/slide_dge.Rmd b/slide_dge.Rmd
@@ -70,6 +70,22 @@ name: intro
 - Advanced designs
 
 
+---
+name: intro2
+
+## Couldn’t we just use a Student’s t test for each gene?
+
+
+```{r, echo=FALSE, out.width="30%", fig.align='center'}
+knitr::include_graphics("data/boxplot.png")
+```
+
+- May have few replicates -> "borrow" information from other genes
+- Multiple testing issues -> Correction
+- Distribution is not normal -> negative binomial methods
+
+
+
 ---
 name: prep