Merge pull request #6 from NCAR/djgagne

Preparing for pypi

LICENSE

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) 2021 National Center for Atmospheric Research
+Copyright (c) 2021 University Corporation for Atmospheric Research
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

echo/VERSION

@@ -0,0 +1 @@
+0.1

environment.yml

@@ -11,18 +11,12 @@ dependencies:
   - numpy
   - scipy
   - matplotlib
-  - seaborn
-  - xarray
-  - netcdf4
-  - tqdm
-  - dask
   - scikit-learn
   - jupyter
   - jupyterlab
   - jupyter_server
   - distributed
   - pip
-  - s3fs
   - pyarrow
   - pytorch
   - torchvision

requirements.txt

@@ -0,0 +1,13 @@
+numpy
+scipy
+matplotlib
+pandas
+optuna
+setuptools
+pyyaml
+scikit-learn
+tensorflow
+torch
+xgboost
+torchvision
+pyarrow

setup.cfg

@@ -0,0 +1,47 @@
+[metadata]
+name = echo-opt
+description = Earth Computer Hyperparameter Optimization: Distributed hyperparameter optimization on HPC and GPU systems with analysis tools.
+long_description = file: README.md
+long_description_content_type = text/markdown
+author = John Schreck
+author_email = [email protected]
+license = MIT
+license_file = LICENSE
+platform = any
+version = file: echo/VERSION
+keywords = machine-learning, hyperparameter, gpu
+classifiers =
+    Programming Language :: Python
+    Programming Language :: Python :: 3.8
+    Programming Language :: Python :: 3.9
+    Programming Language :: Python :: 3.10
+url = https://github.com/NCAR/echo-opt
+
+[options]
+zip_safe = True
+packages =
+    echo
+    echo.src
+include_package_data = True
+setup_requires = setuptools
+python_requires = >=3.7
+install_requires =
+    numpy
+    scipy
+    matplotlib
+    optuna
+    setuptools
+    pandas
+    scikit-learn
+    tensorflow
+    torch
+    xgboost
+    torchvision
+    pyarrow
+    pyyaml
+
+[options.entry_points]
+console_scripts =
+    echo-opt = echo.optimize:main
+    echo-run = echo.run:main
+    echo-report = echo.report:main

setup.py

@@ -1,13 +1,4 @@
 from setuptools import setup
 
-setup(name="echo-opt",
-      version="0.1",
-      description="Earth Computer Hyperparameter Optimization",
-      author="John Schreck, David John Gagne, Charlie Becker, Gabrielle Gantos, Keely Lawrence",
-      license="MIT",
-      url="https://github.com/NCAR/echo-opt",
-      packages=["echo", "echo/src"],
-      entry_points = {
-        'console_scripts': ['echo-opt=echo.optimize:main', 'echo-run=echo.run:main', 'echo-report=echo.report:main'],
-      }
-      )
+if __name__ == "__main__":
+    setup()