merge new changes from reader

buildmaster/old_new_check.py

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+#!/usr/bin/env python3
+"""
+    This scripts checks that the datasets in the file ``dataset_names.yml``
+    are truly the same the same for all intents and purposes
+    For that we check that the:
+        1. Central value are the same
+        2. The covariance matrix are the same
+        3. The computed chi2 is the same
+        4. The t0 chi2 is the same (so multiplicative and additive are equivalent in the new and old implementation)
+
+    In order to perform this check we require a version of validphys that has both the old and new leader.
+    For instance commit 9ddf580f98c99f3c953e7be328df4a4c95c43c14
+
+    All checks are done assuming the same theory for the old and new dataset.
+"""
+
+from argparse import ArgumentParser
+from dataclasses import dataclass
+from functools import cached_property
+
+from lhapdf import setVerbosity
+import numpy as np
+import pandas as pd
+import yaml
+
+from validphys.api import API
+from validphys.convolution import central_predictions
+from validphys.datafiles import path_commondata as old_cd_root
+from validphys.loader import Loader
+
+dataset_names_path = old_cd_root.with_name("new_commondata") / "dataset_names.yml"
+
+setVerbosity(0)
+pdf = "NNPDF40_nnlo_as_01180"
+pdf_load = API.pdf(pdf=pdf)
+DEFAULT_STRICT = False
+
+# This will only work if the code was installed in edit mode, but this is a development script so, fair game
+runcard40 = (
+    old_cd_root.parent.parent.parent.parent.parent
+    / "n3fit"
+    / "runcards"
+    / "reproduce_nnpdf40"
+    / "NNPDF40_nnlo_as_01180_1000.yml"
+)
+if runcard40.exists():
+    runcard40_data_raw = yaml.safe_load(runcard40.read_text())["dataset_inputs"]
+    runcard40_data = [i["dataset"] for i in runcard40_data_raw]
+else:
+    runcard40_data = None
+
+
+class CheckFailed(Exception):
+    pass
+
+
+@dataclass
+class DToCompare:
+    old_name: str
+    new_name: str
+    variant: str = None
+    theory_id: int = 717
+    old_theory_id: int = 717
+
+    def __str__(self):
+        return f"[old: {old_name} vs new: {new_name}]"
+
+    @property
+    def is_positivity(self):
+        return self.new_name.startswith("NNPDF_POS")
+
+    @property
+    def is_integrability(self):
+        return self.new_name.startswith("NNPDF_INTEG")
+
+    @property
+    def is_lagrange(self):
+        return self.is_integrability or self.is_positivity
+
+    @property
+    def generic(self):
+        return {"use_cuts": "internal", "pdf": pdf}
+
+    @property
+    def dataset_input_old(self):
+        di = {"dataset": self.old_name}
+        if self.is_lagrange:
+            di["maxlambda"] = 1.0
+
+        if self.is_positivity:
+            return {"posdataset": di, "theoryid": self.old_theory_id}
+        elif self.is_integrability:
+            return {"integdataset": di, "theoryid": self.old_theory_id}
+        return {"dataset_input": di, "theoryid": self.old_theory_id}
+
+    @property
+    def dataset_input_new(self):
+        di = {"dataset": self.new_name}
+        if self.variant is not None:
+            di["variant"] = self.variant
+        if self.is_lagrange:
+            di["maxlambda"] = 1.0
+
+        if self.is_positivity:
+            return {"posdataset": di, "theoryid": self.theory_id}
+        elif self.is_integrability:
+            return {"integdataset": di, "theoryid": self.theory_id}
+        return {"dataset_input": di, "theoryid": self.theory_id}
+
+    def api_load_dataset(self, dinput):
+        """Load a dataset (positivity or not) with VP"""
+        if self.is_lagrange:
+            if self.new_name.startswith("NNPDF_POS"):
+                return API.posdataset(**self.generic, **dinput)
+            else:
+                return API.integdataset(**self.generic, **dinput)
+        else:
+            return API.dataset(**self.generic, **dinput)
+
+    @cached_property
+    def ds_old(self):
+        """Load the old-commondata dataset"""
+        return self.api_load_dataset(self.dataset_input_old)
+
+    @cached_property
+    def cd_old(self):
+        """Load the commondata object out of the dataset"""
+        return self.ds_old.load_commondata()
+
+    @cached_property
+    def ds_new(self):
+        """Load the new-commondata dataset"""
+        return self.api_load_dataset(self.dataset_input_new)
+
+    @cached_property
+    def cd_new(self):
+        """Load the commondata object out of the dataset"""
+        return self.ds_new.load_commondata()
+
+    def api_call(self, api_function, extra_config=None):
+        """Apply a validphys API call for a given function for both the old and new datasets"""
+        if extra_config is None:
+            extra_config = {}
+        old_val = getattr(API, api_function)(
+            **self.generic, **extra_config, **self.dataset_input_old
+        )
+        new_val = getattr(API, api_function)(
+            **self.generic, **extra_config, **self.dataset_input_new
+        )
+        return old_val, new_val
+
+
+def check_central_values(dcontainer, strict=DEFAULT_STRICT):
+    """Check the central values
+
+    By default, exit if they are not _the same_
+    """
+    cd_old = dcontainer.cd_old
+    cd_new = dcontainer.cd_new
+    if np.allclose(cd_old.central_values, cd_new.central_values):
+        return True
+
+    print(f"# Problem in the data values comparison of {dcontainer}")
+    if strict:
+        raise CheckFailed
+
+    _od = cd_old.central_values
+    _nd = cd_new.central_values
+    rat = np.abs(_od / _nd)
+    if not np.allclose(rat, 1.0, rtol=1e-3):
+        if not np.allclose(rat, 1.0, rtol=1e-2):
+            print("Relative differences are above 1e-2! Panic!")
+            df = pd.concat([_od, _nd, rat], axis=1)
+            breakpoint()
+            return False
+        else:
+            print("Relative differences between 1e-3 and 1e-2... acceptable...")
+    else:
+        print("Relative differences under 1e-3, continuing comparison...")
+
+
+def check_theory(dcontainer):
+    """Returns the old and new predictions"""
+    new_pred = central_predictions(dcontainer.ds_new, pdf_load)
+    old_pred = central_predictions(dcontainer.ds_old, pdf_load)
+    return old_pred, new_pred
+
+
+def check_chi2(dcontainer, strict=DEFAULT_STRICT, rtol=1e-5):
+    """Checks whether the chi2 is the same
+    A failure in the comparison of the chi2 can come from either:
+        1. Data
+        2. Covmat
+        3. Theory
+    Try to give as much information as possible before failure
+    """
+    chi2_old, chi2_new = dcontainer.api_call("central_chi2")
+    if np.allclose(chi2_old, chi2_new, rtol=rtol):
+        return True
+
+    if strict:
+        raise CheckFailed(f"Different chi2: {chi2_old:.4} vs {chi2_new:.4}")
+
+    print(f"# Differences in the computation of chi2 {chi2_old:.5} vs {chi2_new:.5}")
+    # Check the predictions first
+    old_pred, new_pred = check_theory(dcontainer)
+    if not np.allclose(new_pred, old_pred):
+        print("... but the predictions were already different")
+
+    old_covmat, new_covmat = dcontainer.api_call("covmat_from_systematics")
+    if not np.allclose(old_covmat, new_covmat):
+        print("    The covmats are different", end="")
+        if not np.allclose(np.diag(old_covmat), np.diag(new_covmat)):
+            print(" ...even the diagonal!")
+        else:
+            print(" ...but the diagonal is the same!")
+
+
+def run_comparison(dcontainer):
+    """
+    Given an old and new datasets in a container, perform a full comparison
+    """
+    # Check central data
+    check_central_values(dcontainer)
+
+    if dcontainer.is_lagrange:
+        pred_old, pred_new = check_theory(dcontainer)
+        if np.allclose(pred_old, pred_new):
+            print(f" > Comparison ok for positivity dataset {dcontainer}")
+            return
+
+    # chi2!
+    # Computing the chi2 is checking:
+    #   1. That the theory is loaded in the same way
+    #   2. That the (experimental) covmat is created equal
+    # Note that any problem in the data check above might break this
+    check_chi2(dcontainer)
+
+    # Check the chi2... with t0!
+    # This checks that the ADD and MULT systematics are loaded in the same way
+
+    chi2_old_t0, chi2_new_t0 = dcontainer.api_call(
+        "central_chi2", extra_config={"use_t0": True, "t0pdfset": pdf}
+    )
+    if not np.allclose(chi2_old_t0, chi2_new_t0, rtol=1e-5):
+        raise CheckFailed(f"The t0 chi2 is different: {chi2_old_t0:.5} vs {chi2_new_t0:.5}")
+
+    print(f"> Comparison ok! {dcontainer}")
+
+
+def check_40(old_name):
+    if runcard40_data is not None and old_name not in runcard40_data:
+        print(f"\033[92m  Dataset {old_name} was not part of 4.0\033[0m")
+
+
+if __name__ == "__main__":
+    parser = ArgumentParser()
+    parser.add_argument(
+        "-s", "--stop", help="Stop on failure by raising the exception", action="store_true"
+    )
+    parser.add_argument(
+        "-l", "--only-legacy", help="Check only those with variant: legacy", action="store_true"
+    )
+    parser.add_argument(
+        "-v", "--verbose", help="Print the whole information on the failure", action="store_true"
+    )
+    parser.add_argument(
+        "-f",
+        "--filter",
+        help="Simple filter to select a subset of datasets, applied on the new data",
+        type=str,
+        nargs='+',
+    )
+    parser.add_argument("-t", "--tid", help="Theory id, default 717", default=717)
+    parser.add_argument("--old_tid", help="Old Theory id, default 717", default=717)
+    args = parser.parse_args()
+
+    all_ds_names = yaml.safe_load(dataset_names_path.read_text())
+
+    for old_name, new_ds in all_ds_names.items():
+        if isinstance(new_ds, str):
+            new_name = new_ds
+            variant = None
+        else:
+            new_name = new_ds["dataset"]
+            variant = new_ds.get("variant")
+
+        if args.only_legacy and variant != "legacy":
+            continue
+
+        if args.filter is not None:
+            if not any(filter_word in new_name for filter_word in args.filter):
+                continue
+
+        if args.verbose:
+            print(f"###########\n")
+
+        try:
+            # Create the DToCompare container class
+            # which knows how to call validphys for the various informations it needs
+            # and eases the printing
+            dcontainer = DToCompare(
+                old_name, new_name, variant=variant, theory_id=args.tid, old_theory_id=args.tid
+            )
+            run_comparison(dcontainer)
+        except CheckFailed as e:
+            print(f"> Failure for \033[91m\033[1m{old_name}: {new_name}\033[0m\033[0m (check)")
+            # Regardless of the failure mode, tell the user whether this is a 4.0 dataset
+            # But only in case of failure, otherwise why should we care
+            check_40(old_name)
+            if args.stop:
+                raise e
+            if args.verbose:
+                print(e)
+        except Exception as e:
+            print(f"> Failure for \033[91m\033[1m{old_name}: {new_name}\033[0m\033[0m")
+            check_40(old_name)
+            if args.stop:
+                raise e
+            if args.verbose:
+                print(e)
+        except BaseException as e:
+            print(f"> Failure for \033[91m\033[1m{old_name}: {new_name}\033[0m\033[0m")
+            # Before raising the exception, check whether this is just a question of not having the right theory names
+            theory_info = Loader().check_theoryID(args.tid)
+            fk_path = dcontainer.ds_new.commondata.metadata.theory.fktables_to_paths(
+                theory_info.path
+            )
+            if not fk_path[0][0].exists():
+                print("Seems like the theory dictionary is not pointing to actual theories")
+            if args.stop:
+                raise e
+            if args.verbose:
+                print(e)