update pull yml #2
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: ndbc data pull | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| - dev | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| - dev | |
| #schedule: | |
| # uses UTC/GMT time (+ 5 hrs) | |
| ## put on HOLD until stockSMART have finished the reorganization | |
| ####- cron: "0 17 * * 3" # Every Wednesday at 1200 hrs = 1700 UTC | |
| #- cron: "0 */4 * * *" # Every 4th hour on | |
| #- cron: "0 6 * * *" # Every day at 1am EST = 0600 GMT | |
| #- cron: "26 * * * *" # Every hour on hour | |
| #- cron: "0 18 * * 0" # Every Sunday at 1300 hrs = 1800 GMT | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GH_RELEASE }} | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: false | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: set up pandoc | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install command line packages | |
| run: | | |
| sudo apt update | |
| sudo apt-get install libcurl4-openssl-dev libgit2-dev | |
| # sudo apt-get install libgdal-dev libcurl4-gnutls-dev libgit2-dev libudunits2-dev libharfbuzz-dev libfribidi-dev | |
| shell: bash | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.2.0' | |
| - name: Install packages | |
| run: | | |
| install.packages(c("remotes","dplyr", "httr", "here", "usethis","kableExtra","rmarkdown","rlang")) | |
| remotes::install_github("NOAA-EDAB/buoydata") | |
| shell: Rscript {0} | |
| - name: Save current rdas | |
| run: | | |
| load(here::here("data/buoyDataWorld.rda")) | |
| saveRDS(buoyDataWorld,here::here("data-raw/tempData.rds")) | |
| rm(buoyDataWorld) | |
| shell: Rscript {0} | |
| - name: Pull nbdc data | |
| run: | | |
| options(timeout = 60 * 60 * 6) | |
| source(here::here("data-raw/get_buoy_stations.R")) | |
| newData <- get_buoy_stations(exportFile=F,isRunLocal = F) | |
| saveRDS(newData,here::here("data-raw/newData.rds")) | |
| shell: Rscript {0} | |
| - name: Compare current pull with existing | |
| # creates an rmd to send as email | |
| # adds content to news.md | |
| # increments package version in description | |
| run: | | |
| options(timeout = 60 * 60 * 6) | |
| source(here::here("data-raw/compare_data.r")) | |
| # source(here::here("data-raw/update_description.R")) | |
| # source(here::here("data-raw/update_news.R")) | |
| diffs <- compare_data() | |
| #version <- update_description(diffs,digit=3) | |
| #update_news(version,diffs) | |
| rmarkdown::render(here::here("data-raw/sendAsEmail.Rmd"), | |
| params = diffs) | |
| #saveRDS(version,here::here("data-raw/version.rds")) | |
| shell: Rscript {0} | |
| - name: render readme.rmd | |
| run: | | |
| options(timeout = 60 * 60 * 6) | |
| # rmarkdown::render(here::here("README.Rmd")) | |
| shell: Rscript {0} | |
| #- name: Find differences | |
| # Create text explaining differences and append to news.md and release notes | |
| #- name: Find differences | |
| # Create text explaining differences and append to news.md and release notes | |
| # Send email indicating if anything has changed | |
| - name: Send email | |
| uses: dawidd6/action-send-mail@v3 | |
| with: | |
| server_address: smtp.gmail.com | |
| server_port: 465 | |
| username: ${{ secrets.MAIL_USERNAME }} | |
| password: ${{ secrets.MAIL_PASSWORD }} | |
| subject: Github Actions job result | |
| to: [email protected] | |
| from: buoyData GitHub | |
| #body: file://${{github.workspace}}/data-raw/datapull.txt | |
| html_body: file://${{github.workspace}}/data-raw/sendAsEmail.html | |
| #attachments: ./data-raw/sendAsEmail.html | |
| # - name: commit data files | |
| # run: | | |
| # git config user.name github-actions | |
| # git config user.email [email protected] | |
| # git add data/buoyDataWorld.rda | |
| # git add data-raw/datapull.txt | |
| # git add README.Rmd | |
| # git add README.Rmd | |
| # git add NEWS.md | |
| # git add DESCRIPTION | |
| # git commit -m "automated commit from pullLazyData yml" | |
| # git push | |
| # - name: create gh-release | |
| # run: | | |
| # version <- readRDS(here::here("data-raw/version.rds")) | |
| # if(!is.null(version)){ | |
| # usethis::use_github_release(publish = T) | |
| # } | |
| # shell: Rscript {0} | |