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Philosopher 3.3.10
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@prvst prvst released this 28 Sep 20:25
· 560 commits to master since this release
v3.3.10
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Learn about vigilant mode.

Added

  • A new Workspace option allows the use of a custom folder as a temporary folder.
  • The Database now supports multiple database IDs (separate them with a comma).
  • Support for the latest msconvert mzML format.
  • Output prefix flag added to PTMProphet.

Changed

  • The parameter file was updated, and the terms were made more human-readable.
  • The code compilation is now done with GO v1.15.
  • PTMProphet updated to v6.0
  • The Abacus memory footprint as significantly reduced.

Fixed

  • Small bugs and fixes.
  • PSMs lists often contained observations mapping to proteins that did not pass the FDR filter.
  • Bio quant was failing because of the unassigned database path.
  • Some annotation files were being ignored.
  • Added FASTA database file extension back again.

Snapcraft

  • snap install philosopher

Docker images

  • docker pull prvst/philosopher:3.3.10
  • docker pull prvst/philosopher:latest
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