Merge pull request #6 from OpenSEMBA/dev

Adds CI checks in ubuntu with gnu, intel, and intelLLVM compilers

.github/workflows/oneapi_cache_exclude_linux.sh

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+# SPDX-FileCopyrightText: 2020 Intel Corporation
+#
+# SPDX-License-Identifier: MIT
+
+#shellcheck disable=SC2010
+LATEST_VERSION=$(ls -1 /opt/intel/oneapi/compiler/ | grep -v latest | sort | tail -1)
+
+sudo rm -rf /opt/intel/oneapi/compiler/"$LATEST_VERSION"/linux/compiler/lib/ia32_lin
+sudo rm -rf /opt/intel/oneapi/compiler/"$LATEST_VERSION"/linux/bin/ia32
+sudo rm -rf /opt/intel/oneapi/compiler/"$LATEST_VERSION"/linux/lib/emu
+sudo rm -rf /opt/intel/oneapi/compiler/"$LATEST_VERSION"/linux/lib/oclfpga

.github/workflows/oneapi_setup_apt_repo_linux.sh

@@ -0,0 +1,10 @@
+#!/bin/bash
+
+# SPDX-FileCopyrightText: 2020 Intel Corporation
+#
+# SPDX-License-Identifier: MIT
+
+wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB
+sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB
+echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
+sudo apt-get update -o Dir::Etc::sourcelist="sources.list.d/oneAPI.list" -o APT::Get::List-Cleanup="0"

.github/workflows/ubuntu-gnu.yml

@@ -0,0 +1,40 @@
+name: ubuntu-gnu
+
+permissions:
+  actions: write
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+env:
+  FDTDTESTS_TOP_DIR: fdtd-tests
+
+jobs:
+  builds-and-tests:
+    runs-on: ubuntu-latest
+
+    steps:
+
+    - name: Checkout
+      uses: actions/checkout@v4
+      with:
+        submodules: 'recursive'
+
+    - name: Setup ninja
+      uses: seanmiddleditch/gha-setup-ninja@master
+
+    - name: Build application
+      run: |       
+        cmake -S . -B build -G Ninja -DCMAKE_BUILD_TYPE=Release
+        cmake --build build -j
+          
+    - name: Run json-parser tests 
+      run: |
+        ctest --test-dir build/src_json_parser/test/ --output-on-failure
+        
+      

.github/workflows/ubuntu-intel.yml

@@ -0,0 +1,75 @@
+name: ubuntu-intel
+
+env:
+  LINUX_CPP_COMPONENTS: intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic  intel-oneapi-compiler-dpcpp-cpp
+  LINUX_FORTRAN_COMPONENTS: intel-oneapi-compiler-fortran
+  LINUX_MKL_COMPONENTS: "intel-oneapi-mkl intel-oneapi-mkl-devel"
+  LINUX_MPI_COMPONENTS: "intel-oneapi-mpi intel-oneapi-mpi-devel"
+# https://github.com/oneapi-src/oneapi-ci/blob/master/.github/workflows/build_all.yml
+  CTEST_NO_TESTS_ACTION: error
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+jobs:
+
+  builds-and-tests:
+    runs-on: ubuntu-latest
+
+    steps:
+
+    - uses: actions/checkout@v4
+      with:
+        submodules: 'recursive'
+
+    - name: cache install oneAPI
+      id: cache-install
+      uses: actions/cache@v3
+      with:
+        path: |
+          /opt/intel/oneapi
+        key: install-apt
+
+    - name: non-cache install oneAPI
+      if: steps.cache-install.outputs.cache-hit != 'true'
+      timeout-minutes: 10
+      run: |
+        sh -c .github/workflows/oneapi_setup_apt_repo_linux.sh
+        sudo apt install ${{ env.LINUX_CPP_COMPONENTS }} ${{ env.LINUX_FORTRAN_COMPONENTS }} ${{ env.LINUX_MKL_COMPONENTS }} ${{ env.LINUX_MPI_COMPONENTS }}
+
+    - name: Setup ninja
+      uses: seanmiddleditch/gha-setup-ninja@master
+
+    - name: Setup Intel oneAPI environment
+      run: |
+        LATEST_VERSION=$(ls -1 /opt/intel/oneapi/compiler/ | grep -v latest | sort | tail -1)
+        source /opt/intel/oneapi/compiler/"$LATEST_VERSION"/env/vars.sh
+        printenv >> $GITHUB_ENV
+
+    - name: print config log
+      if: ${{ failure() }}
+      run: cat build/CMakeFiles/CMakeConfigureLog.yaml
+
+    # - name: Setup upterm session
+    #   uses: lhotari/action-upterm@v1
+
+    - name: CMake build
+      run: |
+        # export FC=ifort
+        # export CC=icc
+        # export CXX=icpc
+        cmake -S . -B build -G Ninja -DCMAKE_BUILD_TYPE=Release
+        cmake --build build -j
+
+    - name: Run json-parser tests 
+      run: |
+        ctest --test-dir build/src_json_parser/test/ --output-on-failure
+
+    - name: exclude unused files from cache
+      if: steps.cache-install.outputs.cache-hit != 'true'
+      run: sh -c .github/workflows/oneapi_cache_exclude_linux.sh

.github/workflows/ubuntu-intelLLVM.yml

@@ -0,0 +1,75 @@
+name: ubuntu-intelLLVM
+
+env:
+  LINUX_CPP_COMPONENTS: intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic intel-oneapi-compiler-dpcpp-cpp
+  LINUX_FORTRAN_COMPONENTS: intel-oneapi-compiler-fortran
+  LINUX_MKL_COMPONENTS: "intel-oneapi-mkl intel-oneapi-mkl-devel"
+  LINUX_MPI_COMPONENTS: "intel-oneapi-mpi intel-oneapi-mpi-devel"
+# https://github.com/oneapi-src/oneapi-ci/blob/master/.github/workflows/build_all.yml
+  CTEST_NO_TESTS_ACTION: error
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+jobs:
+
+  builds-and-tests:
+    runs-on: ubuntu-latest
+
+    steps:
+
+    - uses: actions/checkout@v4
+      with:
+        submodules: 'recursive'
+
+    - name: cache install oneAPI
+      id: cache-install
+      uses: actions/cache@v3
+      with:
+        path: |
+          /opt/intel/oneapi
+        key: install-apt
+
+    - name: non-cache install oneAPI
+      if: steps.cache-install.outputs.cache-hit != 'true'
+      timeout-minutes: 10
+      run: |
+        sh -c .github/workflows/oneapi_setup_apt_repo_linux.sh
+        sudo apt install ${{ env.LINUX_CPP_COMPONENTS }} ${{ env.LINUX_FORTRAN_COMPONENTS }} ${{ env.LINUX_MKL_COMPONENTS }} ${{ env.LINUX_MPI_COMPONENTS }}
+
+    - name: Setup Intel oneAPI environment
+      run: |
+        LATEST_VERSION=$(ls -1 /opt/intel/oneapi/compiler/ | grep -v latest | sort | tail -1)
+        source /opt/intel/oneapi/compiler/"$LATEST_VERSION"/env/vars.sh
+        printenv >> $GITHUB_ENV
+
+    - name: Setup ninja
+      uses: seanmiddleditch/gha-setup-ninja@master
+
+    - name: print config log
+      if: ${{ failure() }}
+      run: cat build/CMakeFiles/CMakeConfigureLog.yaml
+
+    # - name: Setup upterm session
+    #   uses: lhotari/action-upterm@v1
+
+    - name: CMake build
+      run: |
+        export FC=ifx
+        export CC=icx
+        export CXX=icpx
+        cmake -S . -B build -G Ninja -DCMAKE_BUILD_TYPE=Release
+        cmake --build build -j
+
+    - name: Run json-parser tests 
+      run: |
+        ctest --test-dir build/src_json_parser/test/ --output-on-failure
+
+    - name: exclude unused files from cache
+      if: steps.cache-install.outputs.cache-hit != 'true'
+      run: sh -c .github/workflows/oneapi_cache_exclude_linux.sh

.gitignore

@@ -37,6 +37,7 @@ build/
 build-rls/
 build-dbg/
 build-nv/
+
 CMakeSettings.json
 /CppProperties.json
 

.gitmodules

@@ -1,8 +1,19 @@
-[submodule "src_json_parser/json-fortran"]
-	path = src_json_parser/external/json-fortran
+[submodule "external/json-fortran"]
+	path = external/json-fortran
 	url = [email protected]:lmdiazangulo/json-fortran.git
 	ignore = dirty
-[submodule "src_json_parser/external/fhash"]
-	path = src_json_parser/external/fhash
+
+[submodule "external/fhash"]
+	path = external/fhash
 	url = [email protected]:opensemba/fhash.git
 	ignore = dirty
+
+[submodule "external/lapack"]
+	path = external/lapack
+	url = [email protected]:Reference-LAPACK/lapack.git
+	ignore = dirty
+
+[submodule "external/ngspice"]
+	path = external/ngspice
+	url = [email protected]:opensemba/ngspice
+	ignore = dirty