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experimentId
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@dweindl
dweindl committed Dec 16, 2024
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Showing 37 changed files with 102 additions and 60 deletions.
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0001/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a 0 0.7
obs_a 10 0.1
experimentId observableId time measurement
obs_a 0 0.7
obs_a 10 0.1
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0001/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
10 changes: 5 additions & 5 deletions petabtests/cases/v2.0.0/sbml/0002/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a c0 0 0.7
obs_a c0 10 0.1
obs_a c1 0 0.8
obs_a c1 10 0.2
experimentId observableId time measurement
experiment_c0 obs_a 0 0.7
experiment_c0 obs_a 10 0.1
experiment_c1 obs_a 0 0.8
experiment_c1 obs_a 10 0.2
3 changes: 3 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0002/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
experiment_c1 c1 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0003/_measurements.tsv
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observableId simulationConditionId time measurement observableParameters
obs_a 0 0.7 0.5;2
obs_a 10 0.1 0.5;2
experimentId observableId time measurement observableParameters
obs_a 0 0.7 0.5;2
obs_a 10 0.1 0.5;2
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0003/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0004/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a 0 0.7
obs_a 10 0.1
experimentId observableId time measurement
obs_a 0 0.7
obs_a 10 0.1
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0004/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0005/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a c0 10 2.1
obs_a c1 10 3.2
experimentId observableId time measurement
experiment_c0 obs_a 10 2.1
experiment_c1 obs_a 10 3.2
3 changes: 3 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0005/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
experiment_c1 c1 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0006/_measurements.tsv
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observableId simulationConditionId time measurement observableParameters
obs_a 0 0.7 10
obs_a 10 0.1 15
experimentId observableId time measurement observableParameters
obs_a 0 0.7 10
obs_a 10 0.1 15
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0006/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0007/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a 10 0.2
obs_b 10 0.8
experimentId observableId time measurement
obs_a 10 0.2
obs_b 10 0.8
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0007/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
8 changes: 4 additions & 4 deletions petabtests/cases/v2.0.0/sbml/0008/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a 0 0.7
obs_a 10 0.1
obs_a 10 0.2
experimentId observableId time measurement
obs_a 0 0.7
obs_a 10 0.1
obs_a 10 0.2
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0008/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0009/_measurements.tsv
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observableId preequilibrationConditionId simulationConditionId time measurement
obs_a preeq_c0 c0 1 0.7
obs_a preeq_c0 c0 10 0.1
experimentId observableId time measurement
experiment_preeq_c0_c0 obs_a 1 0.7
experiment_preeq_c0_c0 obs_a 10 0.1
3 changes: 3 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0009/experiments.tsv
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experimentId conditionId time
experiment_preeq_c0_c0 preeq_c0 -inf
experiment_preeq_c0_c0 c0 0.0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0010/_measurements.tsv
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observableId preequilibrationConditionId simulationConditionId time measurement
obs_a preeq_c0 c0 1 0.7
obs_a preeq_c0 c0 10 0.1
experimentId observableId time measurement
experiment_preeq_c0_c0 obs_a 1 0.7
experiment_preeq_c0_c0 obs_a 10 0.1
3 changes: 3 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0010/experiments.tsv
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experimentId conditionId time
experiment_preeq_c0_c0 preeq_c0 -inf
experiment_preeq_c0_c0 c0 0.0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0011/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a c0 0 0.7
obs_a c0 10 0.1
experimentId observableId time measurement
experiment_c0 obs_a 0 0.7
experiment_c0 obs_a 10 0.1
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0011/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0012/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a c0 0 0.7
obs_a c0 10 0.1
experimentId observableId time measurement
experiment_c0 obs_a 0 0.7
experiment_c0 obs_a 10 0.1
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0012/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0013/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a c0 0 0.7
obs_a c0 10 0.1
experimentId observableId time measurement
experiment_c0 obs_a 0 0.7
experiment_c0 obs_a 10 0.1
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0013/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0014/_measurements.tsv
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observableId simulationConditionId time measurement noiseParameters
obs_a 0 0.7 0.5;2
obs_a 10 0.1 0.5;2
experimentId observableId time measurement noiseParameters
obs_a 0 0.7 0.5;2
obs_a 10 0.1 0.5;2
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0014/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0015/_measurements.tsv
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observableId simulationConditionId time measurement noiseParameters
obs_a 0 0.7 noise
obs_a 10 0.1 noise
experimentId observableId time measurement noiseParameters
obs_a 0 0.7 noise
obs_a 10 0.1 noise
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0015/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0016/_measurements.tsv
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observableId simulationConditionId time measurement
obs_a 10 0.2
obs_b 10 0.8
experimentId observableId time measurement
obs_a 10 0.2
obs_b 10 0.8
2 changes: 2 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0016/experiments.tsv
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experimentId conditionId time
experiment_c0 c0 0
6 changes: 3 additions & 3 deletions petabtests/cases/v2.0.0/sbml/0017/_measurements.tsv
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observableId preequilibrationConditionId simulationConditionId time measurement
obs_a preeq_c0 c0 1 0.7
obs_a preeq_c0 c0 10 0.1
experimentId observableId time measurement
experiment_preeq_c0_c0 obs_a 1 0.7
experiment_preeq_c0_c0 obs_a 10 0.1
3 changes: 3 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0017/experiments.tsv
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experimentId conditionId time
experiment_preeq_c0_c0 preeq_c0 -inf
experiment_preeq_c0_c0 c0 0.0
10 changes: 5 additions & 5 deletions petabtests/cases/v2.0.0/sbml/0018/_measurements.tsv
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observableId preequilibrationConditionId simulationConditionId time measurement
obs_a preeq_c0 c0 0 0.1
obs_a preeq_c0 c0 1 0.7
obs_a preeq_c0 c0 10 0.1
obs_b preeq_c0 c0 0 0.1
experimentId observableId time measurement
experiment_preeq_c0_c0 obs_a 0 0.1
experiment_preeq_c0_c0 obs_a 1 0.7
experiment_preeq_c0_c0 obs_a 10 0.1
experiment_preeq_c0_c0 obs_b 0 0.1
3 changes: 3 additions & 0 deletions petabtests/cases/v2.0.0/sbml/0018/experiments.tsv
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experimentId conditionId time
experiment_preeq_c0_c0 preeq_c0 -inf
experiment_preeq_c0_c0 c0 0.0
2 changes: 1 addition & 1 deletion petabtests/cases/v2.0.0/sbml/0019/_measurements.tsv
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observableId simulationConditionId time measurement
observableId experimentId time measurement
obs_a c0 0 0.7
obs_a c0 10 0.1

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