Skip to content

v0.9.0
Compare
Choose a tag to compare
@d-cameron d-cameron released this 04 Nov 12:27
· 1594 commits to master since this release
v0.9.0
c731b98

This version contains a number of features designed to improve usability including:

  • simplified command line arguments - gridss algorithm parameters are now in their own properties file
  • Unbounded number of input categories can be supplied - multi-sample analysis can now be done with more than just two categories
  • ability to supply filter bed blacklist to improve assembly time by ignoring problematic centromeric
  • In-process calling of external aligner during realignment steps - a wrapper script no longer needed
  • bwa now supported as the external aligner during realignment steps
  • LOW_QUAL filter added make default output usable without additional downstream filtering
  • jar packaging and automatic loading of libsswjni.so
Assets 4
Loading