Beta v0.10.0

New Features:

• New experimental atomize tool for splitting haplotypes into basis SNVs #72.
• New experimental call-pedigree tool fo pedigree informed genotype calling.
• Optionally specify just the INFO or FORMAT variant of an optional VCF field #174.
• Use setuptools_scm for versioning #179.
• Added example notebook from 2024 Tools for Polyploids workshop.

VCF Changes:

• Renamed PHQ and PHPM to SQ and SPM for clarity.
• Added INFO/UAN field for number of unique alleles called #174.
• Added INFO/MCI field for proportion of sample with Markov Chain incongruence.
• Added optional fields #174:
  • INFO/AOPSUM (sum of FORMAT/AOP).
  • INFO/ACP and FORMAT/ACP.
  • INFO/SNVDP and FORMAT/SNVDP.