fix the name of sophios parent directory in subdir path (#23)

Co-authored-by: Vasu Jaganath <[email protected]>
PolusAI · Jan 13, 2025 · f3945a4 · f3945a4
1 parent 78384be
commit f3945a4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflows/bbbc.py b/workflows/bbbc.py
@@ -8,7 +8,7 @@ def workflow() -> Workflow:
     bbbcdownload.name = 'BBBC001'
     bbbcdownload.outDir = Path('bbbcdownload.outDir')
 
-    subdirectory = Step(clt_path='../workflow-inference-compiler/cwl_adapters/subdirectory.cwl')
+    subdirectory = Step(clt_path='../sophios/cwl_adapters/subdirectory.cwl')
     subdirectory.directory = bbbcdownload.outDir
     subdirectory.glob_pattern = 'bbbcdownload.outDir/BBBC/BBBC001/raw/Images/human_ht29_colon_cancer_1_images/'