add check=TRUE argument to update,GenomicRanges-method

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GenomicRanges@68361 bc3139a8-67e5-0310-9ffc-ced21a209358
RamsinghLab · Aug 10, 2012 · 7d3cb81 · 7d3cb81
1 parent 041a509
commit 7d3cb81
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/R/GRanges-class.R b/R/GRanges-class.R
@@ -145,7 +145,7 @@ unsafe.update.GRanges <- function(x, ...)
     x
 }
 
-setMethod(update, "GRanges",
+setMethod("update", "GRanges",
     function(object, ..., check=TRUE)
     {
         if (!isTRUEorFALSE(check)) 

diff --git a/R/GenomicRanges-class.R b/R/GenomicRanges-class.R
@@ -399,7 +399,7 @@ setMethod("score", "GenomicRanges", function(x) values(x)$score)
 ### external representations need further customization.
 
 setMethod("update", "GenomicRanges",
-    function(object, ...)
+    function(object, ..., check=TRUE)
     {
         initialize(object, ...)
     }