Changed config

RaqManzano · Feb 15, 2024 · 4bb4e93 · 4bb4e93
1 parent 1d0d9c3
commit 4bb4e93
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/conf/base.config b/conf/base.config
@@ -108,9 +108,9 @@ process {  // base
     withName:'GATK4_APPLYBQSR|GATK4_APPLYBQSR_SPARK|GATK4_BASERECALIBRATOR'{
         cpus         = { check_max( 8 * task.attempt, 'cpus' ) }
         memory       = { check_max( 32.GB * task.attempt, 'memory')}
-        time            = { check_max( 16.h  * task.attempt, 'time' ) }
+        time         = { check_max( 24.h  * task.attempt, 'time' ) }
     }
-    withName:'GATK4_APPLYBQSR|GATK4_APPLYBQSR_SPARK|GATK4_BASERECALIBRATOR|GATK4_GATHERBQSRREPORTS'{
+    withName:'GATK4_GATHERBQSRREPORTS'{
         cpus         = { check_max( 4 * task.attempt, 'cpus' ) }
         memory       = { check_max( 16.GB * task.attempt, 'memory')}
         time            = { check_max( 16.h  * task.attempt, 'time' ) }