[pre-commit.ci] auto fixes from pre-commit.com hooks

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SpikeInterface · Jan 17, 2025 · e8b4fe1 · e8b4fe1
1 parent b44bcaf
commit e8b4fe1
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Showing 3 changed files with 13 additions and 13 deletions.
diff --git a/src/spikeinterface/widgets/sorting_summary.py b/src/spikeinterface/widgets/sorting_summary.py
@@ -18,6 +18,7 @@
 
 _default_displayed_unit_properties = ["firing_rate", "num_spikes", "x", "y", "amplitude", "snr", "rp_violation"]
 
+
 class SortingSummaryWidget(BaseWidget):
     """
     Plots spike sorting summary.
@@ -65,6 +66,7 @@ class SortingSummaryWidget(BaseWidget):
         This replaces the label_choices in the curation_format.
         (spikeinterface_gui backend)
     """
+
     def __init__(
         self,
         sorting_analyzer: SortingAnalyzer,
@@ -82,16 +84,15 @@ def __init__(
         unit_table_properties=None,
         **backend_kwargs,
     ):
-        
+
         if unit_table_properties is not None:
             warnings.warn(
                 "plot_sorting_summary() : unit_table_properties is deprecated, use displayed_unit_properties instead",
                 category=DeprecationWarning,
                 stacklevel=2,
-                )
+            )
             displayed_unit_properties = unit_table_properties
 
-
         sorting_analyzer = self.ensure_sorting_analyzer(sorting_analyzer)
         self.check_extensions(
             sorting_analyzer, ["correlograms", "spike_amplitudes", "unit_locations", "template_similarity"]
@@ -108,7 +109,7 @@ def __init__(
             displayed_unit_properties = list(_default_displayed_unit_properties)
             if extra_unit_properties is not None:
                 displayed_unit_properties += list(extra_unit_properties.keys())
-        
+
         data_plot = dict(
             sorting_analyzer=sorting_analyzer,
             unit_ids=unit_ids,
@@ -230,7 +231,6 @@ def plot_spikeinterface_gui(self, data_plot, **backend_kwargs):
 
         from spikeinterface_gui import run_mainwindow
 
-
         run_mainwindow(
             sorting_analyzer,
             with_traces=True,
@@ -240,4 +240,3 @@ def plot_spikeinterface_gui(self, data_plot, **backend_kwargs):
             extra_unit_properties=data_plot["extra_unit_properties"],
             displayed_unit_properties=data_plot["displayed_unit_properties"],
         )
-
diff --git a/src/spikeinterface/widgets/utils.py b/src/spikeinterface/widgets/utils.py
@@ -245,7 +245,6 @@ def array_to_image(
     return output_image
 
 
-
 def make_units_table_from_sorting(sorting, units_table=None):
     """
     Make a DataFrame from sorting properties.
@@ -266,6 +265,7 @@ def make_units_table_from_sorting(sorting, units_table=None):
 
     if units_table is None:
         import pandas as pd
+
         units_table = pd.DataFrame(index=sorting.unit_ids)
 
     for col in sorting.get_property_keys():
@@ -275,10 +275,11 @@ def make_units_table_from_sorting(sorting, units_table=None):
 
     return units_table
 
+
 def make_units_table_from_analyzer(
-        analyzer,
-        extra_properties=None,
-    ):
+    analyzer,
+    extra_properties=None,
+):
     """
     Make a DataFrame by aggregating :
       * quality metrics
@@ -302,6 +303,7 @@ def make_units_table_from_analyzer(
         Table containing all columns.
     """
     import pandas as pd
+
     all_df = []
 
     if analyzer.get_extension("unit_locations") is not None:

diff --git a/src/spikeinterface/widgets/utils_sortingview.py b/src/spikeinterface/widgets/utils_sortingview.py
@@ -9,7 +9,6 @@
 from .utils import make_units_table_from_sorting, make_units_table_from_analyzer
 
 
-
 def make_serializable(*args):
     dict_to_serialize = {int(i): a for i, a in enumerate(args)}
     serializable_dict = check_json(dict_to_serialize)
@@ -65,7 +64,7 @@ def generate_unit_table_view(
         sorting = sorting_or_sorting_analyzer
         units_tables = make_units_table_from_sorting(sorting)
         # analyzer = None
-    
+
     if unit_properties is None:
         ut_columns = []
         ut_rows = [vv.UnitsTableRow(unit_id=u, values={}) for u in sorting.unit_ids]
@@ -105,5 +104,5 @@ def generate_unit_table_view(
             ut_rows.append(vv.UnitsTableRow(unit_id=unit_id, values=check_json(row_values)))
 
     v_units_table = vv.UnitsTable(rows=ut_rows, columns=ut_columns, similarity_scores=similarity_scores)
-    
+
     return v_units_table