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update vivax clinical model #400

Merged
merged 2 commits into from
Jan 9, 2025
Merged

update vivax clinical model #400

merged 2 commits into from
Jan 9, 2025

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rossaman4
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@rossaman4 rossaman4 commented Dec 10, 2024

Changes to the files WHvivax.cpp, WHvivax.h and vivax.xsd

  • some bugs removed (previous version of WHvivax.cpp was broken)
  • probability of clinical illness updated
  • different relapse classifications introduced (via vivaxClinOption, variants are related to whether the relapse can trigger illness or not based on whether there is a blood-stage infection by the same brood at the same time and whether the primary infection caused illness )
  • Corresponds to manuscript "The probability of acute P vivax illness following primary infection and relapse in Papua New Guinea" (vivaxClinOptions: A1j, A2j, B1j, B2j)
  • nb This is not currently a full vivax model

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@acavelan acavelan left a comment

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Reviewed together with @rossaman4

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acavelan commented Jan 7, 2025

All checks OK. macos-12 is deprecated so the test was cancelled.

@acavelan acavelan merged commit 4c2308f into SwissTPH:main Jan 9, 2025
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3 participants