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Reduce monitoring #1

Merged
merged 3 commits into from
May 7, 2024
Merged

Reduce monitoring #1

merged 3 commits into from
May 7, 2024

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edoyango
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@edoyango edoyango commented May 7, 2024

hi @Adamtaranto

heads up that I've merged episode 2 and 3 into 1 as I thought the workshop was weighted a little too heavily on monitoring. The introduction to tools are all there, but I remove some of the extra excercises - particularly with the GPU monitoring ones.

Feel free to give it a go, otherwise please approve so I know you've seen it.

@edoyango edoyango requested a review from Adamtaranto May 7, 2024 23:47
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github-actions bot commented May 7, 2024

Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

  • 🎯 correct output
  • 🖼️ correct figures
  • ❓ new warnings
  • ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/WEHI-ResearchComputing/Workshop-intermediate-slurm/compare/md-outputs..md-outputs-PR-1

The following changes were observed in the rendered markdown documents:

 02-cpumonitoring.md                            | 824 +++++++++++++++----------
 04-jobarrays.md => 03-jobarrays.md             |   0
 03-moremonitoring.md (gone)                    | 471 --------------
 05-jobdependencies.md => 04-jobdependencies.md |   0
 06-rpython.md => 05-rpython.md                 |   0
 config.yaml                                    |   7 +-
 data/example-programs.tar.gz                   | Bin 364664 -> 423691 bytes
 fig/htop-picpu-2.png                           | Bin 48453 -> 71623 bytes
 md5sum.txt                                     |  11 +-
 9 files changed, 519 insertions(+), 794 deletions(-)
What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2024-05-07 23:48:27 +0000

github-actions bot pushed a commit that referenced this pull request May 7, 2024
@Adamtaranto Adamtaranto merged commit 5e6d277 into main May 7, 2024
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github-actions bot pushed a commit that referenced this pull request May 7, 2024
Auto-generated via {sandpaper}
Source  : 5e6d277
Branch  : main
Author  : Adam Taranto <[email protected]>
Time    : 2024-05-07 23:57:10 +0000
Message : Merge pull request #1 from WEHI-ResearchComputing/reduce-monitoring

Reduce monitoring
github-actions bot pushed a commit that referenced this pull request May 7, 2024
Auto-generated via {sandpaper}
Source  : 33c2850
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-05-07 23:58:18 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : 5e6d277
Branch  : main
Author  : Adam Taranto <[email protected]>
Time    : 2024-05-07 23:57:10 +0000
Message : Merge pull request #1 from WEHI-ResearchComputing/reduce-monitoring

Reduce monitoring
@edoyango edoyango deleted the reduce-monitoring branch May 8, 2024 01:20
github-actions bot pushed a commit that referenced this pull request May 8, 2024
Auto-generated via {sandpaper}
Source  : 33c2850
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-05-07 23:58:18 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : 5e6d277
Branch  : main
Author  : Adam Taranto <[email protected]>
Time    : 2024-05-07 23:57:10 +0000
Message : Merge pull request #1 from WEHI-ResearchComputing/reduce-monitoring

Reduce monitoring
github-actions bot pushed a commit that referenced this pull request May 8, 2024
Auto-generated via {sandpaper}
Source  : 33c2850
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-05-07 23:58:18 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : 5e6d277
Branch  : main
Author  : Adam Taranto <[email protected]>
Time    : 2024-05-07 23:57:10 +0000
Message : Merge pull request #1 from WEHI-ResearchComputing/reduce-monitoring

Reduce monitoring
github-actions bot pushed a commit that referenced this pull request May 14, 2024
Auto-generated via {sandpaper}
Source  : 33c2850
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-05-07 23:58:18 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : 5e6d277
Branch  : main
Author  : Adam Taranto <[email protected]>
Time    : 2024-05-07 23:57:10 +0000
Message : Merge pull request #1 from WEHI-ResearchComputing/reduce-monitoring

Reduce monitoring
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2 participants