M cvManovaTest/cvManovaTest.m

M cvManovaTest/cvManovaTest_model.m M cvManovaTest/cvManovaTest_preprocess.m
allefeld · Nov 1, 2019 · ca2b75f · ca2b75f
1 parent 7d285b9
commit ca2b75f
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Showing 3 changed files with 7 additions and 4 deletions.
diff --git a/cvManovaTest/cvManovaTest.m b/cvManovaTest/cvManovaTest.m
@@ -6,7 +6,7 @@
 %
 % It can also be taken as an example for how to use the implementation.
 %
-% With Matlab 8.5.0 (R2015a) and SPM12 r6685, this script
+% With Matlab R2015a–R2019a and SPM12 r6685, this script
 % produces the following pattern distinctness values on regions:
 %   region 1, contrast 1:  D = 5.443427
 %   region 1, contrast 2:  D = 1.021870
@@ -67,3 +67,4 @@
 % check results
 cvManovaTest_check
 fprintf('\nconsider deleting the directory %s and its contents\n', modelDir)
+
diff --git a/cvManovaTest/cvManovaTest_model.m b/cvManovaTest/cvManovaTest_model.m
@@ -15,14 +15,15 @@
     fmri_spec.timing.fmri_t0 = 12;
     for ri = 1 : nRuns
         vi = (ri - 1) * nVolsPerRun + (1 : nVolsPerRun);
-        vn = arrayfun(@(i) sprintf('%s,%d', [pwd filesep fnrBOLD], i), vi, 'UniformOutput', false);
+        vn = arrayfun(@(i) sprintf('%s,%d', [pwd filesep fnrBOLD], i), ...
+            vi, 'UniformOutput', false);
         Q = nan(nVolsPerRun, 6);
         for i = 1 : nVolsPerRun
             qq = spm_imatrix(mat(:, :, vi(i)) / mat(:, :, vi(1)));
             Q(i, :) = qq(1 : 6);
         end
 
-        fmri_spec.sess(ri).scans = vn;
+        fmri_spec.sess(ri).scans = vn';
         for ci = 1 : numel(conditions)
             fmri_spec.sess(ri).cond(ci).name = conditions{ci};
             fmri_spec.sess(ri).cond(ci).onset = onsets{ri, ci};

diff --git a/cvManovaTest/cvManovaTest_preprocess.m b/cvManovaTest/cvManovaTest_preprocess.m
@@ -7,7 +7,8 @@
     matlabbatch = {};
     for ri = 1 : nRuns
         vi = (ri - 1) * nVolsPerRun + (1 : nVolsPerRun);
-        vn = arrayfun(@(i) sprintf('%s,%d', fnBOLD, i), vi, 'UniformOutput', false);
+        vn = arrayfun(@(i) sprintf('%s,%d', fnBOLD, i), ...
+            vi, 'UniformOutput', false);
         matlabbatch{1}.spm.spatial.realign.estwrite.data{ri} = vn';
     end
     matlabbatch{1}.spm.spatial.realign.estwrite.eoptions.quality = 0.9;