Merge pull request #272 from alliance-genome/gh-actions-permissions-u…

…pdate

Added required content write permissions to handle new read-only default

.github/workflows/build-deploy-documentation.yaml

@@ -11,16 +11,18 @@ on:
 jobs:
   github-pages:
     runs-on: ubuntu-latest
+    permissions:
+      contents: write
     steps:
 
       #----------------------------------------------
       #       check-out repo and set-up python
       #----------------------------------------------
       - name: Check out repository
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
 
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: 3.9
 

.github/workflows/check-pull-request.yaml

@@ -15,10 +15,10 @@ jobs:
       #       check-out repo and set-up python
       #----------------------------------------------
       - name: Check out repository
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
 
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
 

.github/workflows/regenerate_artifacts.yaml

@@ -9,18 +9,20 @@ on:
 jobs:
   generate-artifacts:
     runs-on: ubuntu-latest
+    permissions:
+      contents: write
 
     steps:
     - name: Checkout
-      uses: actions/checkout@v2
+      uses: actions/checkout@v4
 
     - name: Setup Python Environment
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
           python-version: 3.9
 
     - name: Setup Java
-      uses: actions/setup-java@v3
+      uses: actions/setup-java@v4
       with:
         distribution: 'temurin'
         java-version: '8'