PosixPath vs. string type error in bids_utils.py

[NicolasGensollen]

The error in the screenshot seems like a bug to me indeed.

The variable file_path comes from

clinica/clinica/iotools/bids_utils.py

Lines 569 to 573 in 4d700d7

	files_to_read = [f for f in clinical_data_dir.glob(file_name)]
	if file_ext == ".xlsx":
	file_to_read = pd.read_excel(files_to_read[0], sheet_name=sheet)
	elif file_ext == ".csv":
	file_path = files_to_read[0]

Such that it is a PosixPath and not a string. This line should probably be:

if "flutemeta" in file_path.name and study_name == StudyName.AIBL

instead.

Originally posted by @NicolasGensollen in #1374 (comment)