transparent logo #101
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Testing Linux | |
| on: | |
| push: | |
| branches: '*' | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| split: [1] #, 2, 3, 4] # Number of splits | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip cache purge | |
| python -m pip install --upgrade pip | |
| python -m pip install flake8 pytest pytest-mock pytest-split pytest-cov | |
| python -m pip install types-setuptools | |
| python -m pip cache purge | |
| python -m pip install .[strict] | |
| python -m pip cache purge | |
| python -m pip install ase==3.23.0 | |
| - name: Install Julia | |
| run: curl -fsSL https://install.julialang.org | sh -s -- -y | |
| - name: Set up Julia environment (Needed for ACEpotentials.jl interface) | |
| run: | | |
| julia -e 'using Pkg; Pkg.Registry.add("General"); Pkg.Registry.add(Pkg.Registry.RegistrySpec(url="https://github.com/ACEsuit/ACEregistry")); Pkg.add("ACEpotentials"); Pkg.add("DataFrames"); Pkg.add("CSV")' | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest and coverage | |
| run: | | |
| # run the line below locally to update tests durations file | |
| # pytest --cov=autoplex --cov-append --splits 1 --group 1 --durations-path ./tests/test_data/.pytest-split-durations --store-durations | |
| pytest --cov=autoplex --cov-report term-missing --cov-append --splits 1 --group ${{ matrix.split }} -vv --durations-path ./tests/test_data/.pytest-split-durations | |
| - name: Upload coverage | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage-${{ matrix.split }} | |
| path: .coverage | |
| coverage: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: Install Coverage | |
| run: | | |
| python -m pip install coverage[toml] | |
| - name: Download coverage artifacts | |
| continue-on-error: true | |
| uses: actions/download-artifact@v3 | |
| - name: Run coverage | |
| continue-on-error: true | |
| run: | | |
| coverage combine coverage*/.coverage* | |
| coverage report --show-missing | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.9" | |
| cache: pip | |
| cache-dependency-path: pyproject.toml | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install .[docs,strict] | |
| - name: Build | |
| run: sphinx-build -W docs _build |