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Release v1.0.1#38

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FedericaBrando merged 50 commits intomasterbbglab/openvariant:masterfrom developbbglab/openvariant:developCopy head branch name to clipboardDec 16, 2024

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Commits

Commits on Nov 15, 2024

• fix: changed builder enum to classes

  

  David MARTINEZ MILLAN

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• fix: changed process enum to classes

  

  David Martinez Millan

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• fix: tests from builder and process

  

  David Martinez Millan

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• fix: typo error

  

  David Martinez Millan

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• fix: remove all test warnings

  

  David Martinez Millan

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• fix: added latest Python version in github workflow

  

  David Martinez Millan

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Commits on Nov 19, 2024

• build(deps): bump idna from 3.3 to 3.7

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• build(deps): bump tqdm from 4.64.0 to 4.66.3

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• build(deps): bump tornado from 6.2 to 6.4.1

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• build(deps): bump jinja2 from 3.1.2 to 3.1.4

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• build(deps): bump requests from 2.28.1 to 2.32.2

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• build(deps): bump pygments from 2.12.0 to 2.15.0

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• Merge remote-tracking branch 'origin/develop' into 27-openvariant--failing-with-python-313

  

  David Martinez Millan

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• Merge pull request #35 from bbglab/dependabot/pip/pygments-2.15.0

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• Merge pull request #34 from bbglab/dependabot/pip/requests-2.32.2

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• Merge pull request #33 from bbglab/dependabot/pip/jinja2-3.1.4

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• Merge pull request #32 from bbglab/dependabot/pip/tornado-6.4.1

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• Merge branch 'develop' into dependabot/pip/tqdm-4.66.3

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• Merge pull request #31 from bbglab/dependabot/pip/tqdm-4.66.3

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• Merge pull request #30 from bbglab/dependabot/pip/idna-3.7

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• add: config file for ISSUE_TEMPLATE

  

  David Martinez Millan

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Commits on Nov 20, 2024

• add: templates bug and new feature

  

  David Martinez Millan

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• add: templates test

  

  David Martinez Millan

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• Update README.md

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Commits on Nov 22, 2024

• Merge branch 'develop' into 27-openvariant--failing-with-python-313

  dmartmillan

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• Merge pull request #28 from bbglab/27-openvariant--failing-with-python-313

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• build(deps): bump tornado from 6.2 to 6.4.2

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• Merge branch 'develop' into dependabot/pip/tornado-6.4.2

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• Merge pull request #37 from bbglab/dependabot/pip/tornado-6.4.2

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• Update requirements-docs.txt

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• Update .readthedocs.yaml

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• Update requirements-docs.txt

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update .readthedocs.yaml

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• Update requirements-docs.txt

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Commits on Nov 25, 2024

• add: Zenodo dataset

  dmartmillan

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Commits on Dec 12, 2024

• Update README.md

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• Create CITATION.cff

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• Update CITATION.cff

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• Update CITATION.cff

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Commits on Dec 13, 2024

• fix: citation.cff repeated name

  FedericaBrando

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• add: citation to documentation

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• add: release notes

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• add: requirements update for docs

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• update: repeated name CITATION.cff

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Commits on Dec 16, 2024

• fix: update package manager to uv, gh-workflow and bugfix (#39)

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