CpG_Me v1.3
New features:
- Added Insert Size Metrics to paired-end pipeline for GEO compliance, which was done in collaboration with @cemordaunt
Optimizations:
- Added parallel processing for newest trim_galore version
- Increased speed for final html multiQC report by tidying SLURM logs first
- Improved job dependencies and further resource optimizations
- Removed Bismark_to_Permeth_DSS.py by @hyeyeon-hwang since legacy file formats are no longer needed as DMRichR has entirely replaced legacy programs
- Updated version of multiQC to remove paired-end display glitch
There have also been some documentation updates.