bwa-mem2: skip osx due to intel/safestringlib#14

bioconda · Jul 10, 2020 · f1f3925 · f1f3925
1 parent 5a7c461
commit f1f3925
Showing 1 changed file with 7 additions and 0 deletions.
diff --git a/recipes/bwa-mem2/meta.yaml b/recipes/bwa-mem2/meta.yaml
@@ -13,6 +13,13 @@ source:
 
 build:
   number: 0
+  # Compilation fails on OSX:
+  #   ext/safestringlib/include/safe_mem_lib.h:100:16: error: conflicting types for 'memset_s'
+  #   extern errno_t memset_s(void *dest, rsize_t dmax, uint8_t value);
+  #   /Applications/Xcode-9.4.1.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/usr/include/string.h:145:9: note: previous declaration is here
+  #   errno_t memset_s(void *__s, rsize_t __smax, int __c, rsize_t __n) __OSX_AVAILABLE_STARTING(__MAC_10_9, __IPHONE_7_0);
+  # Cause: https://github.com/intel/safestringlib/issues/14
+  skip: True  # [osx]
 
 requirements:
   build: