switch ci to pytest-cov xml generation

biocypher · Jan 30, 2025 · be26e33 · be26e33
1 parent 755feb6
commit be26e33
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Showing 2 changed files with 6 additions and 6 deletions.
diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml
@@ -29,14 +29,14 @@ jobs:
 
       - name: Run tests and generate coverage report
         run: |
-          poetry run coverage run -m pytest test --ignore=./volumes
+          poetry run pytest --cov=biochatter --cov-report=xml test --ignore=./volumes
           poetry run coverage report
-          poetry run coverage xml
         shell: bash
 
       - name: Generate coverage badge
         if: (github.event_name == 'push' && github.ref == 'refs/heads/main') || (github.event_name == 'pull_request' && github.event.action == 'closed' && github.base_ref == 'refs/heads/main' && github.event.pull_request.merged == true)
-        run: poetry run coverage-badge -f -o docs/coverage/coverage.svg
+        run: |
+          poetry run coverage-badge -f -o docs/coverage/coverage.svg
         shell: bash
 
       - name: Commit changes

diff --git a/docs/coverage/coverage.svg b/docs/coverage/coverage.svg