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update runner script (Project-MONAI#1556)
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closes Project-MONAI#1550 
workaround Project-MONAI#1555



### Checks
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [ ] Avoid including large-size files in the PR.
- [ ] Clean up long text outputs from code cells in the notebook.
- [ ] For security purposes, please check the contents and remove any
sensitive info such as user names and private key.
- [ ] Ensure (1) hyperlinks and markdown anchors are working (2) use
relative paths for tutorial repo files (3) put figure and graphs in the
`./figure` folder
- [ ] Notebook runs automatically `./runner.sh -t <path to .ipynb file>`

Signed-off-by: Wenqi Li <[email protected]>
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wyli authored Oct 26, 2023
1 parent 22b49d3 commit 25bbce7
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion runner.sh
Original file line number Diff line number Diff line change
Expand Up @@ -124,7 +124,7 @@ skip_run_papermill=("${skip_run_papermill[@]}" .*nuclei_classification_training_
skip_run_papermill=("${skip_run_papermill[@]}" .*nuclick_training_notebook.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1542
skip_run_papermill=("${skip_run_papermill[@]}" .*nuclei_classification_infer.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1542
skip_run_papermill=("${skip_run_papermill[@]}" .*nuclick_infer.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1542
skip_run_papermill=("${skip_run_papermill[@]}" .*05_spleen_segmentation_lightning.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1550
skip_run_papermill=("${skip_run_papermill[@]}" .*unet_segmentation_3d_ignite_clearml.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1555

# output formatting
separator=""
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