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Link to the BiaPy cell detection tutorial (#233)
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adamltyson authored Aug 2, 2024
1 parent ebbcb24 commit a6be9a0
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Expand Up @@ -46,7 +46,8 @@ Before you use this widget you need three things:
3. Some points defined in the raw data space, e.g. cells detected by [cellfinder](/documentation/cellfinder/index).

```{hint}
This widget will support any points that can be loaded into napari. Many file formats (e.g. the BrainGlobe xml format)
This widget will support any points that can be loaded into napari. Many file formats (e.g. the BrainGlobe xml format,
or a [csv from BiaPy](https://biapy.readthedocs.io/en/latest/tutorials/detection/brain_cell_detection.html))
can be loaded by dragging and dropping them onto the napari window.
```

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14 changes: 14 additions & 0 deletions docs/source/tutorials/index.md
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Expand Up @@ -87,7 +87,20 @@ Analyze and visualize bulk fluorescence tracing data
:link-type: doc
Whole brain cell detection and registration
:::
::::

## Related tutorials
These are tutorials hosted elsewhere that may be useful to BrainGlobe users.

::::{grid} 1 2 2 3
:gutter: 3

:::{grid-item-card} {fas}`brain;sd-text-primary` Cell detection with BiaPy
:img-bottom: images/biapy.png
:link: https://biapy.readthedocs.io/en/latest/tutorials/detection/brain_cell_detection.html
:link-type: url
Whole-brain microscopy analysis with BrainGlobe and BiaPy
:::
::::

```{toctree}
Expand All @@ -105,4 +118,5 @@ cellfinder-retraining
silicon-probe-tracking
tracing-tracking
brainmapper/index
```

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