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Pull requests: broadinstitute/gnomad_qc

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Pull requests list

Add filter_samples_ht and naive_coalesce_partitions to v4 genomes VDS code
#655 opened Jan 30, 2025 by matren395 Loading…
@matren395
Generate de novo calls
#654 opened Jan 29, 2025 by KoalaQin Loading…
@ch-kr @KoalaQin
20
Add federated validity check for summing subsets metrics
#653 opened Jan 23, 2025 by klaricch Loading…
@klaricch
Bump the pip group across 1 directory with 3 updates dependencies python Pull requests that update Python code
#652 opened Jan 8, 2025 by dependabot bot Loading…
1
Add check for missingness to federated validity checks
#642 opened Oct 29, 2024 by klaricch Loading…
@klaricch @mike-w-wilson
44
WIP: Initial commit for Rare Variant Sharing Relatedness v5
#639 opened Sep 26, 2024 by mike-w-wilson • Draft
@mike-w-wilson
Productionize LD code for gnomAD v4 SNVs/Indels v4.1
#634 opened Sep 11, 2024 by matren395 Loading…
@matren395
9
Bump the pip group across 2 directories with 3 updates dependencies
#624 opened Jul 6, 2024 by dependabot bot Loading…
Code to run logistic regression on v4 exomes and genomes with ancesty pcs
#616 opened May 22, 2024 by KoalaQin • Draft
@jkgoodrich @KoalaQin
16
False Duplication VCF Export
#570 opened Mar 7, 2024 by matren395 Loading…
@klaricch @matren395
35
v3 subset script v3
#566 opened Mar 6, 2024 by mike-w-wilson Loading…
@mike-w-wilson @KoalaQin
9
First step for building the mermaid flow chart is to parse all the resources and add them as nodes to the flow chart Documentation
#555 opened Feb 9, 2024 by jkgoodrich Loading…
@ch-kr @jkgoodrich
4
Add summary stats script
#501 opened Oct 23, 2023 by jkgoodrich Loading…
11
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