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Releases: broadinstitute/viral-baseimage

0.2.5

31 Jan 18:10
24edfc8
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What's Changed

  • bump miniconda version 24.1.2 -> 24.11.1 by @tomkinsc in #33

Full Changelog: 0.2.4...0.2.5

0.2.4

17 Jan 18:14
8a78ac0
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  • add bsdmainutils, which "provides banner (as printerbanner), calendar, col, colcrt, colrm, column, from (as bsd-from), hexdump (or hd), look, lorder, ncal (or cal), ul, and write (as bsd-write)."

0.2.3

12 Apr 18:41
e5c0fa1
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  • update qsv 0.123.0 -> 0.125.0 #28
  • include qsvpy rather than qsvlite (~14MB -> ~70MB) #28

0.2.2

12 Mar 14:02
1fc31b5
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0.2.1

08 Mar 22:21
2615746
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  • add qsv to the binaries available in the image (PR #26)

0.2.0

22 Feb 02:04
13c4e3c
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  • update baseimage from Ubuntu 18.04 LTS (bionic) to Ubuntu 22.04 LTS (jammy)
  • gcp package installed is now google-cloud-cli (new name for google-cloud-sdk)
  • xz-utils added for lzma/xz compressed files
  • explicitly set TZ environment variable to UTC (which is the assumption already) in order to reduce the number of C system calls asking for the timezone (see here)
  • bump miniwdl 1.4.1 -> 1.8.0
  • bump dx-toolkit 0.291.1 -> 0.325.1
  • bump dx upload agent 1.5.31 -> 1.5.33
  • bump miniconda version 4.7.12.1 -> py310_23.1.0-1
  • bump udocker 1.3.1 -> 1.3.7

0.1.20

14 Jan 02:28
cb80446
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  • include file (command)

0.1.19

14 Dec 19:33
e60b1ad
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  • bump dxtoolkit 0.288.0 -> 0.291.1 #18
  • add GNU parallel to packages installed in base image #21

0.1.18

13 Nov 04:04
51bb04f
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  • bump ubuntu:bionic-20191029 -> ubuntu:bionic-20200921
  • bump miniconda 4.6.14 -> 4.7.12.1
  • include mamba, CLI-compatible conda package manager with faster dependency solver

0.1.17

05 Nov 04:27
d549cca
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  • Update FROM bionic-20190807 to bionic-20191029
  • update to dx-toolkit 0.288.0