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Write Validation complete only in case of successful validation
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forus committed May 1, 2024
1 parent 7b527b6 commit f5e8217
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion scripts/importer/validateData.py
Original file line number Diff line number Diff line change
Expand Up @@ -5547,6 +5547,7 @@ def validate_study(study_dir, portal_instance, logger, relaxed_mode, strict_maf_

# additional validation between meta files, after all meta files are processed
validate_data_relations(validators_by_meta_type, logger)
logger.info('Validation complete')


def validate_data_dir(data_dir, portal_instance, logger, relaxed_mode, strict_maf_checks):
Expand All @@ -5559,6 +5560,7 @@ def validate_data_dir(data_dir, portal_instance, logger, relaxed_mode, strict_ma
logger.info("Validating %s", meta_file_type)
for validator in validators:
validator.validate()
logger.info('Validation complete')


def get_pom_path():
Expand Down Expand Up @@ -5675,7 +5677,6 @@ def main_validate(args):
collapsing_html_handler.flush()
html_handler.generateHtml(cbio_version=cbio_version)

logger.info('Validation complete')
return exit_status_handler.get_exit_status()


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