Gene Table Update v6 : migrate outdated gene symbols in data files (#…

…2117) * Gene table Update V6 * sync db
cBioPortal · Dec 26, 2024 · 45dcc57 · 45dcc57
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diff --git a/public/acbc_mskcc_2015/data_cna.txt b/public/acbc_mskcc_2015/data_cna.txt
diff --git a/public/acc_2019/data_cna.txt b/public/acc_2019/data_cna.txt
diff --git a/public/acc_tcga/data_cna.txt b/public/acc_tcga/data_cna.txt
diff --git a/public/acc_tcga/data_linear_cna.txt b/public/acc_tcga/data_linear_cna.txt
diff --git a/public/acc_tcga/data_methylation_hm450.txt b/public/acc_tcga/data_methylation_hm450.txt
diff --git a/public/acc_tcga/data_mrna_seq_v2_rsem.txt b/public/acc_tcga/data_mrna_seq_v2_rsem.txt
diff --git a/public/acc_tcga/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt b/public/acc_tcga/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt
diff --git a/public/acc_tcga/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt b/public/acc_tcga/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt
diff --git a/public/acc_tcga_pan_can_atlas_2018/data_cna.txt b/public/acc_tcga_pan_can_atlas_2018/data_cna.txt
diff --git a/public/acc_tcga_pan_can_atlas_2018/data_log2_cna.txt b/public/acc_tcga_pan_can_atlas_2018/data_log2_cna.txt
diff --git a/public/acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt b/public/acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt
diff --git a/public/acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt b/public/acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt
diff --git a/public/acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt b/public/acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt
diff --git a/public/acyc_mskcc_2013/data_cna.txt b/public/acyc_mskcc_2013/data_cna.txt
diff --git a/public/all_phase2_target_2018_pub/data_methylation_hm27.txt b/public/all_phase2_target_2018_pub/data_methylation_hm27.txt
diff --git a/public/all_phase2_target_2018_pub/data_mrna_agilent_microarray.txt b/public/all_phase2_target_2018_pub/data_mrna_agilent_microarray.txt
diff --git a/public/all_phase2_target_2018_pub/data_mrna_agilent_microarray_zscores_ref_all_samples.txt b/public/all_phase2_target_2018_pub/data_mrna_agilent_microarray_zscores_ref_all_samples.txt
diff --git a/...c/all_phase2_target_2018_pub/data_mrna_agilent_microarray_zscores_ref_diploid_samples.txt b/...c/all_phase2_target_2018_pub/data_mrna_agilent_microarray_zscores_ref_diploid_samples.txt
diff --git a/public/all_phase2_target_2018_pub/data_mrna_seq_rpkm.txt b/public/all_phase2_target_2018_pub/data_mrna_seq_rpkm.txt
diff --git a/public/all_phase2_target_2018_pub/data_mrna_seq_rpkm_zscores_ref_all_samples.txt b/public/all_phase2_target_2018_pub/data_mrna_seq_rpkm_zscores_ref_all_samples.txt
diff --git a/public/all_phase2_target_2018_pub/data_mrna_seq_rpkm_zscores_ref_diploid_samples.txt b/public/all_phase2_target_2018_pub/data_mrna_seq_rpkm_zscores_ref_diploid_samples.txt
diff --git a/public/aml_ohsu_2018/data_mrna_seq_cpm.txt b/public/aml_ohsu_2018/data_mrna_seq_cpm.txt
diff --git a/public/aml_ohsu_2018/data_mrna_seq_cpm_zscores_ref_all_samples.txt b/public/aml_ohsu_2018/data_mrna_seq_cpm_zscores_ref_all_samples.txt
diff --git a/public/aml_ohsu_2018/data_mrna_seq_rpkm.txt b/public/aml_ohsu_2018/data_mrna_seq_rpkm.txt
diff --git a/public/aml_ohsu_2018/data_mrna_seq_rpkm_zscores_ref_all_samples.txt b/public/aml_ohsu_2018/data_mrna_seq_rpkm_zscores_ref_all_samples.txt
diff --git a/public/aml_ohsu_2022/data_mrna_seq_rpkm.txt b/public/aml_ohsu_2022/data_mrna_seq_rpkm.txt
diff --git a/public/aml_ohsu_2022/data_mrna_seq_rpkm_zscores_ref_all_samples.txt b/public/aml_ohsu_2022/data_mrna_seq_rpkm_zscores_ref_all_samples.txt
diff --git a/public/aml_target_2018_pub/data_cna.txt b/public/aml_target_2018_pub/data_cna.txt
diff --git a/public/aml_target_2018_pub/data_methylation_hm27.txt b/public/aml_target_2018_pub/data_methylation_hm27.txt
diff --git a/public/aml_target_2018_pub/data_mrna_agilent_microarray.txt b/public/aml_target_2018_pub/data_mrna_agilent_microarray.txt
diff --git a/public/aml_target_2018_pub/data_mrna_agilent_microarray_zscores_ref_all_samples.txt b/public/aml_target_2018_pub/data_mrna_agilent_microarray_zscores_ref_all_samples.txt
diff --git a/public/aml_target_2018_pub/data_mrna_seq_rpkm.txt b/public/aml_target_2018_pub/data_mrna_seq_rpkm.txt
diff --git a/public/aml_target_2018_pub/data_mrna_seq_rpkm_zscores_ref_all_samples.txt b/public/aml_target_2018_pub/data_mrna_seq_rpkm_zscores_ref_all_samples.txt
diff --git a/public/ampca_bcm_2016/data_mutations.txt b/public/ampca_bcm_2016/data_mutations.txt
diff --git a/public/angs_painter_2020/data_cna.txt b/public/angs_painter_2020/data_cna.txt
diff --git a/public/angs_project_painter_2018/data_cna.txt b/public/angs_project_painter_2018/data_cna.txt
diff --git a/public/asclc_msk_2024/data_mrna_seq_tpm.txt b/public/asclc_msk_2024/data_mrna_seq_tpm.txt
diff --git a/public/asclc_msk_2024/data_mrna_seq_tpm_zscores_ref_all_samples.txt b/public/asclc_msk_2024/data_mrna_seq_tpm_zscores_ref_all_samples.txt
diff --git a/public/asclc_msk_2024/data_sv.txt b/public/asclc_msk_2024/data_sv.txt
diff --git a/public/blca_bcan_hcrn_2022/data_RNA_Seq_v2_mRNA_median_Zscores.txt b/public/blca_bcan_hcrn_2022/data_RNA_Seq_v2_mRNA_median_Zscores.txt
diff --git a/public/blca_bgi/data_mutations.txt b/public/blca_bgi/data_mutations.txt
diff --git a/public/blca_cornell_2016/data_cna.txt b/public/blca_cornell_2016/data_cna.txt
diff --git a/public/blca_cornell_2016/data_log2_cna.txt b/public/blca_cornell_2016/data_log2_cna.txt
diff --git a/public/blca_cornell_2016/data_mutations.txt b/public/blca_cornell_2016/data_mutations.txt
diff --git a/public/blca_dfarber_mskcc_2014/data_mutations.txt b/public/blca_dfarber_mskcc_2014/data_mutations.txt
diff --git a/public/blca_msk_tcga_2020/data_cna.txt b/public/blca_msk_tcga_2020/data_cna.txt
diff --git a/public/blca_msk_tcga_2020/data_log2_cna.txt b/public/blca_msk_tcga_2020/data_log2_cna.txt
diff --git a/public/blca_msk_tcga_2020/data_mrna_seq_v2_rsem.txt b/public/blca_msk_tcga_2020/data_mrna_seq_v2_rsem.txt
diff --git a/public/blca_msk_tcga_2020/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt b/public/blca_msk_tcga_2020/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt
diff --git a/public/blca_msk_tcga_2020/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt b/public/blca_msk_tcga_2020/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt
diff --git a/public/blca_msk_tcga_2020/data_mutations.txt b/public/blca_msk_tcga_2020/data_mutations.txt
diff --git a/public/blca_msk_tcga_2020/data_sv.txt b/public/blca_msk_tcga_2020/data_sv.txt
diff --git a/public/blca_mskcc_solit_2012/data_methylation_hm27.txt b/public/blca_mskcc_solit_2012/data_methylation_hm27.txt
diff --git a/public/blca_mskcc_solit_2012/data_mrna_agilent_microarray.txt b/public/blca_mskcc_solit_2012/data_mrna_agilent_microarray.txt
diff --git a/public/blca_mskcc_solit_2012/data_mrna_agilent_microarray_zscores_ref_all_samples.txt b/public/blca_mskcc_solit_2012/data_mrna_agilent_microarray_zscores_ref_all_samples.txt
diff --git a/public/blca_mskcc_solit_2012/data_mrna_agilent_microarray_zscores_ref_diploid_samples.txt b/public/blca_mskcc_solit_2012/data_mrna_agilent_microarray_zscores_ref_diploid_samples.txt
diff --git a/public/blca_tcga/data_cna.txt b/public/blca_tcga/data_cna.txt
diff --git a/public/blca_tcga/data_linear_cna.txt b/public/blca_tcga/data_linear_cna.txt
diff --git a/public/blca_tcga/data_methylation_hm450.txt b/public/blca_tcga/data_methylation_hm450.txt
diff --git a/public/blca_tcga/data_mrna_seq_v2_rsem.txt b/public/blca_tcga/data_mrna_seq_v2_rsem.txt
diff --git a/public/blca_tcga/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt b/public/blca_tcga/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt
diff --git a/public/blca_tcga/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt b/public/blca_tcga/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt
diff --git a/public/blca_tcga/data_mutations.txt b/public/blca_tcga/data_mutations.txt
diff --git a/public/blca_tcga_pan_can_atlas_2018/data_cna.txt b/public/blca_tcga_pan_can_atlas_2018/data_cna.txt
diff --git a/public/blca_tcga_pan_can_atlas_2018/data_log2_cna.txt b/public/blca_tcga_pan_can_atlas_2018/data_log2_cna.txt
diff --git a/public/blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt b/public/blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt
diff --git a/public/blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt b/public/blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt