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Update README.md
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johli authored Oct 5, 2024
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Expand Up @@ -5,7 +5,7 @@ This tutorial decribes how to process a .bigwig sequencing experiment into compr
First, activate the conda environment and run the script 'download_dependencies.sh' to download required auxiliary files.
```sh
conda activate borzoi_py310
cd ~/borzoi/tutorials/legacy/make_data
cd ~/borzoi/tutorials/latest/make_data
./download_dependencies.sh
```

Expand Down Expand Up @@ -39,4 +39,4 @@ In this example, the Makefile creates 8 cross-validation folds of TFRecords with

*Notes*:
- See [here](https://github.com/calico/borzoi-paper/tree/main/data/training) for a description of the scripts called by the Makefile to create TFRecords.
- In the latest version of Borzoi models, a modified hg38 fasta genome is used in the Makefile where the allele with highest overall allele frequency (from gnomAD) is substituted at each position.
- In the latest version of Borzoi models, a modified hg38 fasta genome is used in the Makefile where the allele with highest overall frequency (from gnomAD) is substituted at each position.

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