3.5.0 - GRCh38 Ready
GRCh38 users: please see/update to 3.5.3
- Changes required for use with GRCh38 compatible Battenberg R
- some reference files for chromosome X will require renaming in GRCh37
mv 1000_genomes_GC_corr_chr_23.txt.gz 1000_genomes_GC_corr_chr_X.txt.gz
mv 1000genomesAlleles2012_chr23.txt 1000genomesAlleles2012_chrX.txt
mv 1000genomesloci2012_chr23.txt 1000genomesloci2012_chrX.txt
- This release points to cancerit fork of core battenberg algorithm here