v0.6.2

Getting Started

miniwdl run

• Accept HTTP[S] URIs for the -i input JSON file
• Fix log file handle leak which would eventually cause 'Too many open files' error (#301)
• Improved error reporting in file URI download step
• Document guidelines for optimal performance and reliability

Standing limitations:

• Task output files must reside in or under the initial working directory (#214)
• Task input files are mounted read-only by default; commands to rename or remove them can succeed only with --copy-input-files (#210)
• Namespace discrepancies may interfere with specifying optional inputs to sub-workflow calls (#193)

Please vote on these and/or report other interoperability problems via Issues!

miniwdl check

• Prevent StringCoercion and OptionalCoercion warnings on some typical interpolation use cases
• Improve UnusedImport detection

WDL

• Permit "comments" in input JSON (ignore keys starting with #)
• Allow URI-downloaded WDL to use .. updir relative imports