add gha to push wheel

.github/workflows/build-and-push.yml

@@ -1,16 +1,23 @@
-name: Build and push docker image
+name: Build and push docker image and package
 
 on:
   release:
     types: 
       - published
+  push:
+    branches:
+      - ninabernick/package
   workflow_dispatch:
 
 jobs:
   build-and-push:
     name: Build and push docker image
     runs-on: ubuntu-latest
-
+    environment:
+      name: pypi
+      url: https://pypi.org/p/${{ github.repository }}
+    permissions:
+      id-token: write # IMPORTANT: this permission is mandatory for trusted publishing
     steps:
     - name: checkout code
       uses: actions/checkout@v4
@@ -44,7 +51,13 @@ jobs:
       uses: docker/build-push-action@v6
       with:
         context: .
-        push: true
+        # push: true #TODO add back
         tags: |
           ghcr.io/${{ github.repository }}:${{ github.event.release.tag_name }}
           ghcr.io/${{ github.repository }}:latest
+
+    - name: Publish package distributions to PyPI
+      uses: pypa/gh-action-pypi-publish@release/v1
+      with:
+        repository-url: https://test.pypi.org/legacy/ #TODO remove when ready to publish
+

pyproject.toml

@@ -2,11 +2,14 @@
 name = "platformics"
 # placeholder version that will be replace by poetry-dynamic-versioning
 version = "0.1.1"
-description = "Platformics bio entities framework"
-authors = ["CZI Infectious Disease Team <[email protected]>"]
+description = "Codegen Python GraphQL Entity Framework"
+authors = ["CZI Team <[email protected]>"]
 license = "MIT License"
 readme = "README.md"
 packages = [{include = "platformics"}]
+# requires-python = ">=3.12"
+repository = "https://github.com/chanzuckerberg/platformics"
+# todo add classifiers
 
 [tool.poetry.scripts]
 platformics = 'platformics.cli.main:cli'
@@ -30,8 +33,7 @@ httpx = "^0.24.1"
 [tool.poetry.dependencies]
 python = "^3.12"
 fastapi = "^0.110.0"
-# biopython 1.83 fails installation on m1 macs. The issue is fixed upstream so we're pinning to a specific commit until the next release.
-biopython = { git = "https://github.com/biopython/biopython.git", rev = "e0731edc892b653dee10b1f68acf795086e6f3f0" }
+biopython = "^1.84"
 asyncpg = "^0.28.0"
 alembic = "^1.11.1"
 sgqlc = "^16.3"