Merge pull request #298 from cidgoh/spatil/nmdc-schema-pattern

update NMDC LinkML YAML
cidgoh · Apr 22, 2022 · ba8b936 · ba8b936
2 parents 629da86 + 6d82532
commit ba8b936
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Showing 2 changed files with 52,146 additions and 3,435 deletions.
diff --git a/script/linkml.py b/script/linkml.py
@@ -90,7 +90,7 @@ def encoder(encoder_obj):
     # output
 
     # Presence of "slots" in class indicates field hierarchy
-    if schema_spec.class_slots(class_obj.name):
+    if schema_spec.class_slots(name):
 
         content["specifications"][name] = class_obj
 
@@ -110,6 +110,8 @@ def encoder(encoder_obj):
 
 class_names = content["specifications"].keys()
 
+# TODO: add section ordering implementation block
+
 # code block to sort class slots by rank
 for cls_name in class_names:
     specification = content["specifications"][cls_name]