add nf-test workflow to test modules with nf-test #1

	name: Run nf-test on github_actions_mza

	on:
	push:
	branches:
	- 'github_actions_mza'
	workflow_dispatch:
	inputs:
	nextflow_version:
	description: 'Nextflow version to install'
	type: string
	default: '24.10.1'

	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	NXF_ANSI_LOG: false
	NFT_VER: '0.9.2' # nf-test version
	NXF_SINGULARITY_CACHEDIR: ${{ github.workspace }}/.singularity
	NXF_SINGULARITY_LIBRARYDIR: ${{ github.workspace }}/.singularity

	jobs:
	nf-test:
	runs-on: ubuntu-latest
	name: Run nf-test on ubuntu-latest
	strategy:
	matrix:
	profile: [singularity]
	shard: [1, 2, 3]

	env:
	TOTAL_SHARDS: 3

	steps:
	# Clean the workspace for a fresh run
	- name: Clean Workspace
	run: \|
	rm -rf $GITHUB_WORKSPACE/*

	# Check out the repository
	- name: Checkout Code
	uses: actions/checkout@v4
	with:
	fetch-depth: 0

	# Install Nextflow
	- name: Install Nextflow
	run: \|
	curl -s https://get.nextflow.io \| bash
	sudo mv nextflow /usr/local/bin/
	nextflow -version

	# Set up environmental variables for Nextflow
	- name: Set Nextflow Environment Variables
	run: \|
	echo "export NXF_VER=${{ github.event.inputs.nextflow_version }}" >> $GITHUB_ENV

	# Run nf-test for each profile and shard
	- name: Run nf-test Action
	run: \|
	echo "Running nf-test for profile: ${{ matrix.profile }}, shard: ${{ matrix.shard }}"
	nf-test --profile ${{ matrix.profile }} --shard ${{ matrix.shard }} --total-shards ${{ env.TOTAL_SHARDS }}

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