-
Notifications
You must be signed in to change notification settings - Fork 215
Commit
by our users! Users, Users, Users!
- Loading branch information
There are no files selected for viewing
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -60,6 +60,10 @@ | |
--yMax $advancedOpt.yMax | ||
#end if | ||
#if $advancedOpt.outFileNameData: | ||
--outFileNameData $outFileNameData | ||
This comment has been minimized.
Sorry, something went wrong.
This comment has been minimized.
Sorry, something went wrong.
bgruening
Author
Member
|
||
#end if | ||
@KMEANS_CLUSTERING@ | ||
#end if | ||
|
@@ -154,6 +158,8 @@ | |
label="Make one plot per group of regions" | ||
help="The default is to make one plot per bigWig file, i.e., all samples next to each other. Choosing this option will make one plot per group of regions. " /> | ||
|
||
<param argument="--outFileNameData" type="boolean" label="Save the data underlying the average profile" | ||
help="This option will create an additional output file." /> | ||
|
||
<param argument="--yMin" type="float" value="" size="3" optional="true" | ||
label="Minimum value for the Y-axis of the summary plot. Leave empty for automatic values"/> | ||
|
@@ -168,6 +174,11 @@ | |
<outputs> | ||
<expand macro="output_image_file_format" /> | ||
<expand macro="output_graphic_outputs" /> | ||
|
||
<data format="tabular" name="outFileNameData" label="${tool.name} on ${on_string}: Underlying data"> | ||
<filter>outFileNameData is True</filter> | ||
</data> | ||
|
||
</outputs> | ||
<tests> | ||
<test> | ||
|
I'll do the same thing for plotHeatmap, since this option will work there again once #294 is merged into
develop
. We'll then have this for plotPCA, plotProfile and plotHeatmap both at the command line and in Galaxy.